Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC10.35□□□□□ -0.75
Shank1D3YZU1 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Shank1D3YZU1 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Shank1D3YZU1 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC10.35□□□□□ -0.75
Shank1D3YZU1 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Shank1D3YZU1 Gcg-201ENSMUST00000102733 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Shank1D3YZU1 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Shank1D3YZU1 Gm13445-201ENSMUST00000121664 307 ntBASIC10.35□□□□□ -0.75
Shank1D3YZU1 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC10.35□□□□□ -0.75
Shank1D3YZU1 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Shank1D3YZU1 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC10.35□□□□□ -0.75
Shank1D3YZU1 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Shank1D3YZU1 Gm17709-201ENSMUST00000174536 1096 ntBASIC10.35□□□□□ -0.75
Shank1D3YZU1 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Shank1D3YZU1 Gm42511-201ENSMUST00000196160 234 ntBASIC10.35□□□□□ -0.75
Shank1D3YZU1 Gm5982-201ENSMUST00000196234 512 ntBASIC10.35□□□□□ -0.75
Shank1D3YZU1 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC10.35□□□□□ -0.75
Shank1D3YZU1 Gm26670-202ENSMUST00000226862 340 ntBASIC10.35□□□□□ -0.75
Shank1D3YZU1 AC142266.1-201ENSMUST00000228107 415 ntBASIC10.35□□□□□ -0.75
Shank1D3YZU1 Tex30-201ENSMUST00000027215 1272 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Shank1D3YZU1 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Shank1D3YZU1 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Shank1D3YZU1 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Shank1D3YZU1 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Shank1D3YZU1 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Shank1D3YZU1 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC10.34□□□□□ -0.75
Shank1D3YZU1 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Shank1D3YZU1 Gm45003-201ENSMUST00000205875 2158 ntBASIC10.34□□□□□ -0.75
Shank1D3YZU1 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Shank1D3YZU1 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Shank1D3YZU1 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Shank1D3YZU1 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC10.34□□□□□ -0.75
Shank1D3YZU1 Gm8451-201ENSMUST00000170338 447 ntBASIC10.34□□□□□ -0.75
Shank1D3YZU1 Gm27956-201ENSMUST00000175604 260 ntBASIC10.34□□□□□ -0.75
Shank1D3YZU1 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Shank1D3YZU1 Gm45085-201ENSMUST00000209100 441 ntBASIC10.34□□□□□ -0.75
Shank1D3YZU1 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Shank1D3YZU1 Gm7536-201ENSMUST00000077389 444 ntBASIC10.34□□□□□ -0.75
Shank1D3YZU1 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Shank1D3YZU1 Gm5453-201ENSMUST00000080866 447 ntBASIC10.34□□□□□ -0.75
Shank1D3YZU1 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Shank1D3YZU1 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Shank1D3YZU1 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Shank1D3YZU1 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Shank1D3YZU1 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Shank1D3YZU1 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Shank1D3YZU1 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Shank1D3YZU1 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Shank1D3YZU1 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Shank1D3YZU1 Gm37391-201ENSMUST00000194891 2318 ntBASIC10.34□□□□□ -0.75
Shank1D3YZU1 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Shank1D3YZU1 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC10.34□□□□□ -0.75
Shank1D3YZU1 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Shank1D3YZU1 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Shank1D3YZU1 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Shank1D3YZU1 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Shank1D3YZU1 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC10.34□□□□□ -0.75
Shank1D3YZU1 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC10.34□□□□□ -0.75
Shank1D3YZU1 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Shank1D3YZU1 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Shank1D3YZU1 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Shank1D3YZU1 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC10.34□□□□□ -0.75
Shank1D3YZU1 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Shank1D3YZU1 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Shank1D3YZU1 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Shank1D3YZU1 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC10.33□□□□□ -0.76
Shank1D3YZU1 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC10.33□□□□□ -0.76
Shank1D3YZU1 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Shank1D3YZU1 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Shank1D3YZU1 Gm44216-201ENSMUST00000203942 157 ntBASIC10.33□□□□□ -0.76
Shank1D3YZU1 AC170597.1-201ENSMUST00000221956 440 ntTSL 2 BASIC10.33□□□□□ -0.76
Shank1D3YZU1 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC10.33□□□□□ -0.76
Shank1D3YZU1 Tprg-201ENSMUST00000056087 1084 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Shank1D3YZU1 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Shank1D3YZU1 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Shank1D3YZU1 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Shank1D3YZU1 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Shank1D3YZU1 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Shank1D3YZU1 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Shank1D3YZU1 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Shank1D3YZU1 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Shank1D3YZU1 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Shank1D3YZU1 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Shank1D3YZU1 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Shank1D3YZU1 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Shank1D3YZU1 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Shank1D3YZU1 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Shank1D3YZU1 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Shank1D3YZU1 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Shank1D3YZU1 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Shank1D3YZU1 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC10.33□□□□□ -0.76
Shank1D3YZU1 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Shank1D3YZU1 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC10.33□□□□□ -0.76
Shank1D3YZU1 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC10.33□□□□□ -0.76
Shank1D3YZU1 Gm37782-201ENSMUST00000194879 678 ntBASIC10.33□□□□□ -0.76
Shank1D3YZU1 Gm6423-201ENSMUST00000204315 934 ntBASIC10.33□□□□□ -0.76
Shank1D3YZU1 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC10.33□□□□□ -0.76
Shank1D3YZU1 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC10.33□□□□□ -0.76
Shank1D3YZU1 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC10.33□□□□□ -0.76
Shank1D3YZU1 Ensa-202ENSMUST00000058230 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms