Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scn7aB1AYL1 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scn7aB1AYL1 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC14.54□□□□□ -0.08
Scn7aB1AYL1 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC14.54□□□□□ -0.08
Scn7aB1AYL1 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Scn7aB1AYL1 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Scn7aB1AYL1 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scn7aB1AYL1 Gm8019-201ENSMUST00000119317 587 ntBASIC14.54□□□□□ -0.08
Scn7aB1AYL1 Gm12136-201ENSMUST00000120460 1209 ntBASIC14.54□□□□□ -0.08
Scn7aB1AYL1 Gm6441-201ENSMUST00000120983 696 ntBASIC14.54□□□□□ -0.08
Scn7aB1AYL1 Gm15287-201ENSMUST00000132564 751 ntTSL 2 BASIC14.54□□□□□ -0.08
Scn7aB1AYL1 Tnni1-204ENSMUST00000139986 651 ntTSL 5 BASIC14.54□□□□□ -0.08
Scn7aB1AYL1 Tcstv1-201ENSMUST00000178510 1280 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Scn7aB1AYL1 Gm7939-201ENSMUST00000201233 1050 ntBASIC14.54□□□□□ -0.08
Scn7aB1AYL1 BC080696-201ENSMUST00000202858 1218 ntBASIC14.54□□□□□ -0.08
Scn7aB1AYL1 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Scn7aB1AYL1 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Scn7aB1AYL1 Gm20735-202ENSMUST00000212387 519 ntTSL 2 BASIC14.54□□□□□ -0.08
Scn7aB1AYL1 AC152169.1-201ENSMUST00000223901 701 ntBASIC14.54□□□□□ -0.08
Scn7aB1AYL1 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Scn7aB1AYL1 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scn7aB1AYL1 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scn7aB1AYL1 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scn7aB1AYL1 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Scn7aB1AYL1 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Scn7aB1AYL1 Hsd3b1-202ENSMUST00000107016 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scn7aB1AYL1 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Scn7aB1AYL1 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC14.53□□□□□ -0.08
Scn7aB1AYL1 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Scn7aB1AYL1 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC14.53□□□□□ -0.08
Scn7aB1AYL1 Msl1-202ENSMUST00000037930 1303 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Scn7aB1AYL1 Arhgef3-204ENSMUST00000225949 3198 ntBASIC14.53□□□□□ -0.08
Scn7aB1AYL1 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Scn7aB1AYL1 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scn7aB1AYL1 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Scn7aB1AYL1 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scn7aB1AYL1 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC14.53□□□□□ -0.08
Scn7aB1AYL1 Pax5-212ENSMUST00000173733 885 ntTSL 5 BASIC14.53□□□□□ -0.08
Scn7aB1AYL1 Gm9204-201ENSMUST00000212641 947 ntBASIC14.53□□□□□ -0.08
Scn7aB1AYL1 CT009713.2-201ENSMUST00000225532 1149 ntBASIC14.53□□□□□ -0.08
Scn7aB1AYL1 CT030195.2-201ENSMUST00000226074 1286 ntBASIC14.53□□□□□ -0.08
Scn7aB1AYL1 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scn7aB1AYL1 Gm8894-201ENSMUST00000074642 666 ntBASIC14.53□□□□□ -0.08
Scn7aB1AYL1 Krtap2-4-201ENSMUST00000074926 828 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Scn7aB1AYL1 Olfr115-201ENSMUST00000076936 939 ntAPPRIS P2 BASIC14.53□□□□□ -0.08
Scn7aB1AYL1 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Scn7aB1AYL1 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scn7aB1AYL1 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scn7aB1AYL1 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scn7aB1AYL1 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scn7aB1AYL1 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC14.53□□□□□ -0.08
Scn7aB1AYL1 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Scn7aB1AYL1 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scn7aB1AYL1 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Scn7aB1AYL1 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Scn7aB1AYL1 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scn7aB1AYL1 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Scn7aB1AYL1 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.53□□□□□ -0.08
Scn7aB1AYL1 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Scn7aB1AYL1 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Scn7aB1AYL1 Gm16288-201ENSMUST00000137940 367 ntBASIC14.52□□□□□ -0.08
Scn7aB1AYL1 Hoxd3os1-203ENSMUST00000145799 511 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Scn7aB1AYL1 Gm29642-201ENSMUST00000186170 921 ntTSL 2 BASIC14.52□□□□□ -0.08
Scn7aB1AYL1 Gm8384-201ENSMUST00000190905 704 ntBASIC14.52□□□□□ -0.08
Scn7aB1AYL1 Gm19817-201ENSMUST00000199764 2132 ntBASIC14.52□□□□□ -0.08
Scn7aB1AYL1 Ormdl2-203ENSMUST00000219215 1051 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Scn7aB1AYL1 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC14.52□□□□□ -0.08
Scn7aB1AYL1 Defb29-201ENSMUST00000060598 462 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Scn7aB1AYL1 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Scn7aB1AYL1 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC14.52□□□□□ -0.08
Scn7aB1AYL1 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Scn7aB1AYL1 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.52□□□□□ -0.08
Scn7aB1AYL1 AC153524.2-202ENSMUST00000220401 1794 ntBASIC14.52□□□□□ -0.08
Scn7aB1AYL1 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
Scn7aB1AYL1 Mkrn1-ps1-201ENSMUST00000122035 1390 ntBASIC14.52□□□□□ -0.09
Scn7aB1AYL1 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Scn7aB1AYL1 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Scn7aB1AYL1 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Scn7aB1AYL1 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Scn7aB1AYL1 Bcl2l11-204ENSMUST00000103211 672 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
Scn7aB1AYL1 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Scn7aB1AYL1 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Scn7aB1AYL1 Gm23745-201ENSMUST00000104230 125 ntBASIC14.52□□□□□ -0.09
Scn7aB1AYL1 Nifk-202ENSMUST00000112688 849 ntTSL 5 BASIC14.52□□□□□ -0.09
Scn7aB1AYL1 4930412O13Rik-202ENSMUST00000114919 558 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
Scn7aB1AYL1 Gm12947-201ENSMUST00000116114 420 ntBASIC14.52□□□□□ -0.09
Scn7aB1AYL1 Gm25288-201ENSMUST00000122800 265 ntBASIC14.52□□□□□ -0.09
Scn7aB1AYL1 Gm15886-201ENSMUST00000123155 1250 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Scn7aB1AYL1 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Scn7aB1AYL1 Aamdc-209ENSMUST00000144858 380 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Scn7aB1AYL1 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Scn7aB1AYL1 7420461P10Rik-201ENSMUST00000169439 781 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Scn7aB1AYL1 Dnajc4-202ENSMUST00000179118 840 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Scn7aB1AYL1 Mir6387-201ENSMUST00000184042 108 ntBASIC14.52□□□□□ -0.09
Scn7aB1AYL1 Ighv1-2-201ENSMUST00000195325 378 ntBASIC14.52□□□□□ -0.09
Scn7aB1AYL1 Trav11n-201ENSMUST00000200113 343 ntBASIC14.52□□□□□ -0.09
Scn7aB1AYL1 4930486N12Rik-201ENSMUST00000206668 632 ntBASIC14.52□□□□□ -0.09
Scn7aB1AYL1 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC14.52□□□□□ -0.09
Scn7aB1AYL1 Timm9-210ENSMUST00000221892 734 ntTSL 5 BASIC14.52□□□□□ -0.09
Scn7aB1AYL1 Nsmce2-203ENSMUST00000227173 1122 ntBASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms