Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Gm12516-201ENSMUST00000120819 385 ntBASIC13.76□□□□□ -0.21
Ube3bQ9ES34 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC13.76□□□□□ -0.21
Ube3bQ9ES34 Gm21778-201ENSMUST00000178779 471 ntBASIC13.76□□□□□ -0.21
Ube3bQ9ES34 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC13.76□□□□□ -0.21
Ube3bQ9ES34 Gm28925-201ENSMUST00000188586 168 ntBASIC13.76□□□□□ -0.21
Ube3bQ9ES34 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC13.76□□□□□ -0.21
Ube3bQ9ES34 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ube3bQ9ES34 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ube3bQ9ES34 Gm5468-202ENSMUST00000227851 682 ntBASIC13.76□□□□□ -0.21
Ube3bQ9ES34 Gm9826-201ENSMUST00000029124 1299 ntBASIC13.76□□□□□ -0.21
Ube3bQ9ES34 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ube3bQ9ES34 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ube3bQ9ES34 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC13.76□□□□□ -0.21
Ube3bQ9ES34 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Ube3bQ9ES34 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ube3bQ9ES34 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ube3bQ9ES34 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC13.76□□□□□ -0.21
Ube3bQ9ES34 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ube3bQ9ES34 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ube3bQ9ES34 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ube3bQ9ES34 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Ube3bQ9ES34 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ube3bQ9ES34 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC13.75□□□□□ -0.21
Ube3bQ9ES34 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ube3bQ9ES34 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC13.75□□□□□ -0.21
Ube3bQ9ES34 Nudt13-207ENSMUST00000224311 1574 ntBASIC13.75□□□□□ -0.21
Ube3bQ9ES34 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ube3bQ9ES34 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ube3bQ9ES34 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ube3bQ9ES34 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC13.75□□□□□ -0.21
Ube3bQ9ES34 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ube3bQ9ES34 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC13.75□□□□□ -0.21
Ube3bQ9ES34 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ube3bQ9ES34 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ube3bQ9ES34 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ube3bQ9ES34 Gm6655-201ENSMUST00000201932 1309 ntBASIC13.75□□□□□ -0.21
Ube3bQ9ES34 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC13.75□□□□□ -0.21
Ube3bQ9ES34 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ube3bQ9ES34 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ube3bQ9ES34 Gm15528-201ENSMUST00000117821 864 ntBASIC13.75□□□□□ -0.21
Ube3bQ9ES34 Gm14665-201ENSMUST00000122294 557 ntBASIC13.75□□□□□ -0.21
Ube3bQ9ES34 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ube3bQ9ES34 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC13.75□□□□□ -0.21
Ube3bQ9ES34 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC13.75□□□□□ -0.21
Ube3bQ9ES34 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Ube3bQ9ES34 AC138290.1-201ENSMUST00000219242 820 ntTSL 5 BASIC13.75□□□□□ -0.21
Ube3bQ9ES34 AC102542.1-201ENSMUST00000225204 1138 ntBASIC13.75□□□□□ -0.21
Ube3bQ9ES34 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Ube3bQ9ES34 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ube3bQ9ES34 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ube3bQ9ES34 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ube3bQ9ES34 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC13.75□□□□□ -0.21
Ube3bQ9ES34 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Ube3bQ9ES34 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ube3bQ9ES34 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ube3bQ9ES34 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Ube3bQ9ES34 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC13.75□□□□□ -0.21
Ube3bQ9ES34 Gm44755-201ENSMUST00000207830 2102 ntBASIC13.75□□□□□ -0.21
Ube3bQ9ES34 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ube3bQ9ES34 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ube3bQ9ES34 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ube3bQ9ES34 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ube3bQ9ES34 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ube3bQ9ES34 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ube3bQ9ES34 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ube3bQ9ES34 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Ube3bQ9ES34 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ube3bQ9ES34 Gm44573-201ENSMUST00000191753 2370 ntBASIC13.74□□□□□ -0.21
Ube3bQ9ES34 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ube3bQ9ES34 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ube3bQ9ES34 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ube3bQ9ES34 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ube3bQ9ES34 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ube3bQ9ES34 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC13.74□□□□□ -0.21
Ube3bQ9ES34 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ube3bQ9ES34 Gm13384-201ENSMUST00000117166 1344 ntBASIC13.74□□□□□ -0.21
Ube3bQ9ES34 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ube3bQ9ES34 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC13.74□□□□□ -0.21
Ube3bQ9ES34 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Ube3bQ9ES34 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Ube3bQ9ES34 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
Ube3bQ9ES34 Gm12899-201ENSMUST00000120565 551 ntBASIC13.74□□□□□ -0.21
Ube3bQ9ES34 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC13.74□□□□□ -0.21
Ube3bQ9ES34 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC13.74□□□□□ -0.21
Ube3bQ9ES34 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ube3bQ9ES34 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ube3bQ9ES34 Gm23694-201ENSMUST00000179335 110 ntBASIC13.74□□□□□ -0.21
Ube3bQ9ES34 Gm28388-201ENSMUST00000186262 437 ntBASIC13.74□□□□□ -0.21
Ube3bQ9ES34 Gm37284-201ENSMUST00000193607 539 ntBASIC13.74□□□□□ -0.21
Ube3bQ9ES34 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ube3bQ9ES34 Gm45071-201ENSMUST00000205353 571 ntBASIC13.74□□□□□ -0.21
Ube3bQ9ES34 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
Ube3bQ9ES34 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Ube3bQ9ES34 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ube3bQ9ES34 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Ube3bQ9ES34 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ube3bQ9ES34 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ube3bQ9ES34 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ube3bQ9ES34 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ube3bQ9ES34 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms