Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Lima1Q9ERG0 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Lima1Q9ERG0 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Lima1Q9ERG0 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lima1Q9ERG0 AC126444.1-201ENSMUST00000225938 1768 ntBASIC11.39□□□□□ -0.59
Lima1Q9ERG0 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lima1Q9ERG0 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
Lima1Q9ERG0 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Lima1Q9ERG0 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC11.39□□□□□ -0.59
Lima1Q9ERG0 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Lima1Q9ERG0 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lima1Q9ERG0 Gm14723-201ENSMUST00000118686 215 ntBASIC11.39□□□□□ -0.59
Lima1Q9ERG0 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Lima1Q9ERG0 Mir1938-201ENSMUST00000158746 100 ntBASIC11.39□□□□□ -0.59
Lima1Q9ERG0 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Lima1Q9ERG0 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Lima1Q9ERG0 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Lima1Q9ERG0 Gm27046-201ENSMUST00000182160 463 ntBASIC11.39□□□□□ -0.59
Lima1Q9ERG0 Gm6114-201ENSMUST00000182472 968 ntBASIC11.39□□□□□ -0.59
Lima1Q9ERG0 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC11.39□□□□□ -0.59
Lima1Q9ERG0 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC11.39□□□□□ -0.59
Lima1Q9ERG0 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC11.39□□□□□ -0.59
Lima1Q9ERG0 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC11.39□□□□□ -0.59
Lima1Q9ERG0 Gm45331-201ENSMUST00000209868 554 ntBASIC11.39□□□□□ -0.59
Lima1Q9ERG0 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC11.39□□□□□ -0.59
Lima1Q9ERG0 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lima1Q9ERG0 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lima1Q9ERG0 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC11.39□□□□□ -0.59
Lima1Q9ERG0 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Lima1Q9ERG0 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lima1Q9ERG0 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lima1Q9ERG0 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lima1Q9ERG0 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Lima1Q9ERG0 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lima1Q9ERG0 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Lima1Q9ERG0 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lima1Q9ERG0 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lima1Q9ERG0 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC11.39□□□□□ -0.59
Lima1Q9ERG0 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC11.39□□□□□ -0.59
Lima1Q9ERG0 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lima1Q9ERG0 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lima1Q9ERG0 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lima1Q9ERG0 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Lima1Q9ERG0 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lima1Q9ERG0 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Lima1Q9ERG0 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lima1Q9ERG0 Gm8862-201ENSMUST00000198379 1346 ntBASIC11.38□□□□□ -0.59
Lima1Q9ERG0 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lima1Q9ERG0 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Lima1Q9ERG0 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Lima1Q9ERG0 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lima1Q9ERG0 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.38□□□□□ -0.59
Lima1Q9ERG0 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lima1Q9ERG0 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lima1Q9ERG0 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lima1Q9ERG0 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Lima1Q9ERG0 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
Lima1Q9ERG0 Gm22323-201ENSMUST00000103832 109 ntBASIC11.38□□□□□ -0.59
Lima1Q9ERG0 Gm5419-201ENSMUST00000119301 527 ntBASIC11.38□□□□□ -0.59
Lima1Q9ERG0 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lima1Q9ERG0 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Lima1Q9ERG0 Gm44364-201ENSMUST00000198368 141 ntBASIC11.38□□□□□ -0.59
Lima1Q9ERG0 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Lima1Q9ERG0 Gm19187-201ENSMUST00000206781 892 ntBASIC11.38□□□□□ -0.59
Lima1Q9ERG0 Gm45691-201ENSMUST00000206905 1120 ntBASIC11.38□□□□□ -0.59
Lima1Q9ERG0 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC11.38□□□□□ -0.59
Lima1Q9ERG0 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lima1Q9ERG0 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Lima1Q9ERG0 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lima1Q9ERG0 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Lima1Q9ERG0 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lima1Q9ERG0 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lima1Q9ERG0 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lima1Q9ERG0 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Lima1Q9ERG0 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC11.38□□□□□ -0.59
Lima1Q9ERG0 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC11.38□□□□□ -0.59
Lima1Q9ERG0 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lima1Q9ERG0 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC11.38□□□□□ -0.59
Lima1Q9ERG0 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lima1Q9ERG0 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lima1Q9ERG0 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Lima1Q9ERG0 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Lima1Q9ERG0 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lima1Q9ERG0 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lima1Q9ERG0 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Lima1Q9ERG0 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC11.37□□□□□ -0.59
Lima1Q9ERG0 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lima1Q9ERG0 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Lima1Q9ERG0 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lima1Q9ERG0 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lima1Q9ERG0 Gm11989-201ENSMUST00000117240 672 ntBASIC11.37□□□□□ -0.59
Lima1Q9ERG0 Gm11362-201ENSMUST00000118838 850 ntBASIC11.37□□□□□ -0.59
Lima1Q9ERG0 Gm7722-201ENSMUST00000120646 741 ntBASIC11.37□□□□□ -0.59
Lima1Q9ERG0 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Lima1Q9ERG0 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC11.37□□□□□ -0.59
Lima1Q9ERG0 Gm43179-201ENSMUST00000198797 275 ntBASIC11.37□□□□□ -0.59
Lima1Q9ERG0 Gm43822-201ENSMUST00000200285 476 ntBASIC11.37□□□□□ -0.59
Lima1Q9ERG0 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC11.37□□□□□ -0.59
Lima1Q9ERG0 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Lima1Q9ERG0 Gzmn-202ENSMUST00000225535 989 ntBASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms