Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rpa3Q9CQ71 Gm4978-201ENSMUST00000071565 801 ntBASIC12.21□□□□□ -0.45
Rpa3Q9CQ71 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.45
Rpa3Q9CQ71 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Rpa3Q9CQ71 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rpa3Q9CQ71 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Rpa3Q9CQ71 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rpa3Q9CQ71 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rpa3Q9CQ71 Gm38089-201ENSMUST00000193585 1514 ntBASIC12.21□□□□□ -0.46
Rpa3Q9CQ71 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rpa3Q9CQ71 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Rpa3Q9CQ71 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rpa3Q9CQ71 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rpa3Q9CQ71 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rpa3Q9CQ71 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rpa3Q9CQ71 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC12.2□□□□□ -0.46
Rpa3Q9CQ71 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rpa3Q9CQ71 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rpa3Q9CQ71 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rpa3Q9CQ71 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rpa3Q9CQ71 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC12.2□□□□□ -0.46
Rpa3Q9CQ71 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rpa3Q9CQ71 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rpa3Q9CQ71 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rpa3Q9CQ71 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rpa3Q9CQ71 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rpa3Q9CQ71 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rpa3Q9CQ71 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rpa3Q9CQ71 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rpa3Q9CQ71 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rpa3Q9CQ71 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rpa3Q9CQ71 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rpa3Q9CQ71 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC12.2□□□□□ -0.46
Rpa3Q9CQ71 Gm10807-201ENSMUST00000177134 795 ntBASIC12.2□□□□□ -0.46
Rpa3Q9CQ71 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC12.2□□□□□ -0.46
Rpa3Q9CQ71 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC12.2□□□□□ -0.46
Rpa3Q9CQ71 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rpa3Q9CQ71 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC12.2□□□□□ -0.46
Rpa3Q9CQ71 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC12.2□□□□□ -0.46
Rpa3Q9CQ71 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rpa3Q9CQ71 Lect2-202ENSMUST00000225183 823 ntBASIC12.2□□□□□ -0.46
Rpa3Q9CQ71 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rpa3Q9CQ71 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rpa3Q9CQ71 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Rpa3Q9CQ71 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rpa3Q9CQ71 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rpa3Q9CQ71 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rpa3Q9CQ71 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Rpa3Q9CQ71 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rpa3Q9CQ71 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rpa3Q9CQ71 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rpa3Q9CQ71 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC12.2□□□□□ -0.46
Rpa3Q9CQ71 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rpa3Q9CQ71 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rpa3Q9CQ71 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rpa3Q9CQ71 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rpa3Q9CQ71 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rpa3Q9CQ71 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rpa3Q9CQ71 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rpa3Q9CQ71 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rpa3Q9CQ71 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rpa3Q9CQ71 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC12.2□□□□□ -0.46
Rpa3Q9CQ71 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rpa3Q9CQ71 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rpa3Q9CQ71 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rpa3Q9CQ71 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rpa3Q9CQ71 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rpa3Q9CQ71 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC12.19□□□□□ -0.46
Rpa3Q9CQ71 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rpa3Q9CQ71 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rpa3Q9CQ71 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
Rpa3Q9CQ71 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rpa3Q9CQ71 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rpa3Q9CQ71 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Rpa3Q9CQ71 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rpa3Q9CQ71 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC12.19□□□□□ -0.46
Rpa3Q9CQ71 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rpa3Q9CQ71 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rpa3Q9CQ71 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rpa3Q9CQ71 Mir680-2-201ENSMUST00000102163 110 ntBASIC12.19□□□□□ -0.46
Rpa3Q9CQ71 Gm23251-201ENSMUST00000103773 110 ntBASIC12.19□□□□□ -0.46
Rpa3Q9CQ71 Gm14071-201ENSMUST00000117817 509 ntBASIC12.19□□□□□ -0.46
Rpa3Q9CQ71 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC12.19□□□□□ -0.46
Rpa3Q9CQ71 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rpa3Q9CQ71 Gm37246-201ENSMUST00000192665 835 ntBASIC12.19□□□□□ -0.46
Rpa3Q9CQ71 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Rpa3Q9CQ71 Gm9445-201ENSMUST00000207454 1285 ntBASIC12.19□□□□□ -0.46
Rpa3Q9CQ71 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC12.19□□□□□ -0.46
Rpa3Q9CQ71 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC12.19□□□□□ -0.46
Rpa3Q9CQ71 Mettl6-204ENSMUST00000227595 1027 ntBASIC12.19□□□□□ -0.46
Rpa3Q9CQ71 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rpa3Q9CQ71 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rpa3Q9CQ71 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rpa3Q9CQ71 Gm9785-201ENSMUST00000062642 1006 ntBASIC12.19□□□□□ -0.46
Rpa3Q9CQ71 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rpa3Q9CQ71 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rpa3Q9CQ71 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rpa3Q9CQ71 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rpa3Q9CQ71 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rpa3Q9CQ71 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms