Protein–RNA interactions for Protein: Q99PM3

Gtf2a1, Transcription initiation factor IIA subunit 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2a1Q99PM3 Zic3-201ENSMUST00000088627 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gtf2a1Q99PM3 Vps8-205ENSMUST00000118138 3060 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Gtf2a1Q99PM3 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Gtf2a1Q99PM3 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gtf2a1Q99PM3 Olfm4-203ENSMUST00000228749 2801 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Gtf2a1Q99PM3 Zmpste24-201ENSMUST00000058754 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gtf2a1Q99PM3 Timm9-208ENSMUST00000221797 2564 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Gtf2a1Q99PM3 A330049N07Rik-203ENSMUST00000220010 1989 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Gtf2a1Q99PM3 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.54□□□□□ -0.4
Gtf2a1Q99PM3 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Gtf2a1Q99PM3 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gtf2a1Q99PM3 Kif28-201ENSMUST00000131716 3526 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Gtf2a1Q99PM3 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC12.54□□□□□ -0.4
Gtf2a1Q99PM3 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Gtf2a1Q99PM3 Ap1m2-201ENSMUST00000003397 1706 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gtf2a1Q99PM3 Wdr89-202ENSMUST00000187307 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gtf2a1Q99PM3 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gtf2a1Q99PM3 Eif2s2-201ENSMUST00000099173 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gtf2a1Q99PM3 Arhgap4-202ENSMUST00000114404 2895 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Gtf2a1Q99PM3 Prr30-201ENSMUST00000057718 1862 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Gtf2a1Q99PM3 Erbb3-201ENSMUST00000082059 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gtf2a1Q99PM3 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gtf2a1Q99PM3 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Gtf2a1Q99PM3 Cngb1-204ENSMUST00000121162 3336 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Gtf2a1Q99PM3 Gm45699-201ENSMUST00000212838 1576 ntTSL 2 BASIC12.53□□□□□ -0.4
Gtf2a1Q99PM3 Dhx32-202ENSMUST00000063669 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gtf2a1Q99PM3 Gm21969-201ENSMUST00000178644 4402 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Gtf2a1Q99PM3 Sall4-203ENSMUST00000103074 3741 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Gtf2a1Q99PM3 Plxna3-201ENSMUST00000004326 6943 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gtf2a1Q99PM3 Rnf121-201ENSMUST00000089052 2344 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Gtf2a1Q99PM3 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC12.53□□□□□ -0.4
Gtf2a1Q99PM3 Gm14441-201ENSMUST00000121960 540 ntBASIC12.53□□□□□ -0.4
Gtf2a1Q99PM3 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC12.53□□□□□ -0.4
Gtf2a1Q99PM3 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gtf2a1Q99PM3 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC12.53□□□□□ -0.4
Gtf2a1Q99PM3 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Gtf2a1Q99PM3 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC12.53□□□□□ -0.4
Gtf2a1Q99PM3 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.53□□□□□ -0.4
Gtf2a1Q99PM3 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gtf2a1Q99PM3 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gtf2a1Q99PM3 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gtf2a1Q99PM3 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Gtf2a1Q99PM3 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC12.53□□□□□ -0.4
Gtf2a1Q99PM3 Dnm2-203ENSMUST00000115404 3455 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Gtf2a1Q99PM3 Gm32511-202ENSMUST00000217021 2069 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Gtf2a1Q99PM3 Rpgrip1-213ENSMUST00000181401 3963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gtf2a1Q99PM3 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gtf2a1Q99PM3 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Gtf2a1Q99PM3 Sbf2-205ENSMUST00000164759 7090 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Gtf2a1Q99PM3 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gtf2a1Q99PM3 Cdc23-203ENSMUST00000133181 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gtf2a1Q99PM3 Gm45289-201ENSMUST00000211048 2577 ntBASIC12.53□□□□□ -0.4
Gtf2a1Q99PM3 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Gtf2a1Q99PM3 Slc18a2-201ENSMUST00000026084 3803 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gtf2a1Q99PM3 Gm21759-201ENSMUST00000178345 1828 ntBASIC12.53□□□□□ -0.4
Gtf2a1Q99PM3 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.53□□□□□ -0.4
Gtf2a1Q99PM3 Supt7l-205ENSMUST00000202421 3056 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Gtf2a1Q99PM3 Padi3-201ENSMUST00000026377 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gtf2a1Q99PM3 Miga2-202ENSMUST00000100214 3586 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gtf2a1Q99PM3 Armc2-201ENSMUST00000095729 4855 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Gtf2a1Q99PM3 Sfxn2-201ENSMUST00000026011 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Gtf2a1Q99PM3 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Gtf2a1Q99PM3 Gm7742-201ENSMUST00000167648 1527 ntBASIC12.52□□□□□ -0.4
Gtf2a1Q99PM3 Gm7732-201ENSMUST00000170486 1527 ntBASIC12.52□□□□□ -0.4
Gtf2a1Q99PM3 Gm7740-201ENSMUST00000186171 1527 ntBASIC12.52□□□□□ -0.4
Gtf2a1Q99PM3 Gm7736-201ENSMUST00000096981 1527 ntBASIC12.52□□□□□ -0.4
Gtf2a1Q99PM3 Gm53-204ENSMUST00000150490 3257 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Gtf2a1Q99PM3 Plekhb2-201ENSMUST00000027297 3279 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Gtf2a1Q99PM3 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.52□□□□□ -0.4
Gtf2a1Q99PM3 3632454L22Rik-202ENSMUST00000153610 2872 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Gtf2a1Q99PM3 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Gtf2a1Q99PM3 1700001J11Rik-202ENSMUST00000190330 2463 ntBASIC12.52□□□□□ -0.4
Gtf2a1Q99PM3 Gm37039-201ENSMUST00000193733 2485 ntBASIC12.52□□□□□ -0.4
Gtf2a1Q99PM3 Csrnp3-208ENSMUST00000176109 2958 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Gtf2a1Q99PM3 Il18bp-202ENSMUST00000209368 2596 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Gtf2a1Q99PM3 Zfp330-201ENSMUST00000034147 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Gtf2a1Q99PM3 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Gtf2a1Q99PM3 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Gtf2a1Q99PM3 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gtf2a1Q99PM3 Pld1-201ENSMUST00000067757 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gtf2a1Q99PM3 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC12.52□□□□□ -0.41
Gtf2a1Q99PM3 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC12.52□□□□□ -0.41
Gtf2a1Q99PM3 Gm23119-201ENSMUST00000158610 140 ntBASIC12.52□□□□□ -0.41
Gtf2a1Q99PM3 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC12.52□□□□□ -0.41
Gtf2a1Q99PM3 Gm9727-201ENSMUST00000161387 555 ntBASIC12.52□□□□□ -0.41
Gtf2a1Q99PM3 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.52□□□□□ -0.41
Gtf2a1Q99PM3 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.52□□□□□ -0.41
Gtf2a1Q99PM3 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.52□□□□□ -0.41
Gtf2a1Q99PM3 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC12.52□□□□□ -0.41
Gtf2a1Q99PM3 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Gtf2a1Q99PM3 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.52□□□□□ -0.41
Gtf2a1Q99PM3 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Gtf2a1Q99PM3 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.52□□□□□ -0.41
Gtf2a1Q99PM3 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gtf2a1Q99PM3 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gtf2a1Q99PM3 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gtf2a1Q99PM3 Gpr146-202ENSMUST00000053120 1040 ntBASIC12.52□□□□□ -0.41
Gtf2a1Q99PM3 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Gtf2a1Q99PM3 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Gtf2a1Q99PM3 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms