Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trim8Q99PJ2 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
Trim8Q99PJ2 Gm10312-201ENSMUST00000078515 489 ntBASIC11.33□□□□□ -0.6
Trim8Q99PJ2 Gm13437-201ENSMUST00000122434 1981 ntBASIC11.33□□□□□ -0.6
Trim8Q99PJ2 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim8Q99PJ2 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trim8Q99PJ2 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim8Q99PJ2 Gm6157-201ENSMUST00000199935 1897 ntBASIC11.33□□□□□ -0.6
Trim8Q99PJ2 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC11.33□□□□□ -0.6
Trim8Q99PJ2 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim8Q99PJ2 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim8Q99PJ2 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Trim8Q99PJ2 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Trim8Q99PJ2 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trim8Q99PJ2 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim8Q99PJ2 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Trim8Q99PJ2 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim8Q99PJ2 Gm38292-201ENSMUST00000192646 3045 ntBASIC11.33□□□□□ -0.6
Trim8Q99PJ2 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trim8Q99PJ2 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Trim8Q99PJ2 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
Trim8Q99PJ2 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Trim8Q99PJ2 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC11.32□□□□□ -0.6
Trim8Q99PJ2 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Trim8Q99PJ2 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trim8Q99PJ2 Gm42571-201ENSMUST00000201197 2464 ntBASIC11.32□□□□□ -0.6
Trim8Q99PJ2 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Trim8Q99PJ2 Gm13135-201ENSMUST00000117628 3121 ntBASIC11.32□□□□□ -0.6
Trim8Q99PJ2 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trim8Q99PJ2 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Trim8Q99PJ2 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trim8Q99PJ2 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim8Q99PJ2 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim8Q99PJ2 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim8Q99PJ2 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Trim8Q99PJ2 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Trim8Q99PJ2 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Trim8Q99PJ2 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Trim8Q99PJ2 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Trim8Q99PJ2 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Trim8Q99PJ2 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Trim8Q99PJ2 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC11.32□□□□□ -0.6
Trim8Q99PJ2 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
Trim8Q99PJ2 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC11.32□□□□□ -0.6
Trim8Q99PJ2 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trim8Q99PJ2 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC11.32□□□□□ -0.6
Trim8Q99PJ2 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC11.32□□□□□ -0.6
Trim8Q99PJ2 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim8Q99PJ2 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Trim8Q99PJ2 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trim8Q99PJ2 Gm45865-201ENSMUST00000211815 945 ntBASIC11.32□□□□□ -0.6
Trim8Q99PJ2 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC11.32□□□□□ -0.6
Trim8Q99PJ2 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trim8Q99PJ2 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC11.32□□□□□ -0.6
Trim8Q99PJ2 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim8Q99PJ2 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trim8Q99PJ2 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim8Q99PJ2 Lrtm1-203ENSMUST00000224760 3060 ntBASIC11.32□□□□□ -0.6
Trim8Q99PJ2 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim8Q99PJ2 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trim8Q99PJ2 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.32□□□□□ -0.6
Trim8Q99PJ2 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trim8Q99PJ2 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim8Q99PJ2 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim8Q99PJ2 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trim8Q99PJ2 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trim8Q99PJ2 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Trim8Q99PJ2 Olfr1490-202ENSMUST00000213900 5165 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Trim8Q99PJ2 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trim8Q99PJ2 AC126444.1-201ENSMUST00000225938 1768 ntBASIC11.31□□□□□ -0.6
Trim8Q99PJ2 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim8Q99PJ2 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim8Q99PJ2 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC11.31□□□□□ -0.6
Trim8Q99PJ2 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim8Q99PJ2 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim8Q99PJ2 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim8Q99PJ2 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC11.31□□□□□ -0.6
Trim8Q99PJ2 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim8Q99PJ2 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim8Q99PJ2 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim8Q99PJ2 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Trim8Q99PJ2 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim8Q99PJ2 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim8Q99PJ2 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trim8Q99PJ2 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim8Q99PJ2 Gm11439-201ENSMUST00000118598 409 ntBASIC11.31□□□□□ -0.6
Trim8Q99PJ2 Gm13297-201ENSMUST00000120205 934 ntBASIC11.31□□□□□ -0.6
Trim8Q99PJ2 Gm13350-201ENSMUST00000120519 479 ntBASIC11.31□□□□□ -0.6
Trim8Q99PJ2 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC11.31□□□□□ -0.6
Trim8Q99PJ2 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trim8Q99PJ2 Gm5070-201ENSMUST00000177599 862 ntBASIC11.31□□□□□ -0.6
Trim8Q99PJ2 Gm9230-201ENSMUST00000188228 532 ntBASIC11.31□□□□□ -0.6
Trim8Q99PJ2 Gm7783-201ENSMUST00000204795 781 ntBASIC11.31□□□□□ -0.6
Trim8Q99PJ2 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.31□□□□□ -0.6
Trim8Q99PJ2 Gzmn-202ENSMUST00000225535 989 ntBASIC11.31□□□□□ -0.6
Trim8Q99PJ2 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim8Q99PJ2 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim8Q99PJ2 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Trim8Q99PJ2 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Trim8Q99PJ2 Gm45206-201ENSMUST00000206885 2285 ntBASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms