Protein–RNA interactions for Protein: Q99NB9

Sf3b1, Splicing factor 3B subunit 1, mousemouse

Known RBP Predictions only

Length 1,304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1Q99NB9 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sf3b1Q99NB9 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sf3b1Q99NB9 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sf3b1Q99NB9 Gm23680-201ENSMUST00000083162 164 ntBASIC12.27□□□□□ -0.45
Sf3b1Q99NB9 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.27□□□□□ -0.45
Sf3b1Q99NB9 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Sf3b1Q99NB9 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sf3b1Q99NB9 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sf3b1Q99NB9 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sf3b1Q99NB9 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sf3b1Q99NB9 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sf3b1Q99NB9 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sf3b1Q99NB9 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sf3b1Q99NB9 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sf3b1Q99NB9 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sf3b1Q99NB9 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sf3b1Q99NB9 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sf3b1Q99NB9 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sf3b1Q99NB9 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sf3b1Q99NB9 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Sf3b1Q99NB9 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sf3b1Q99NB9 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Sf3b1Q99NB9 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sf3b1Q99NB9 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sf3b1Q99NB9 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Sf3b1Q99NB9 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sf3b1Q99NB9 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sf3b1Q99NB9 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sf3b1Q99NB9 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sf3b1Q99NB9 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sf3b1Q99NB9 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sf3b1Q99NB9 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sf3b1Q99NB9 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sf3b1Q99NB9 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sf3b1Q99NB9 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sf3b1Q99NB9 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sf3b1Q99NB9 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC12.26□□□□□ -0.45
Sf3b1Q99NB9 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Sf3b1Q99NB9 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
Sf3b1Q99NB9 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC12.26□□□□□ -0.45
Sf3b1Q99NB9 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC12.26□□□□□ -0.45
Sf3b1Q99NB9 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sf3b1Q99NB9 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sf3b1Q99NB9 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sf3b1Q99NB9 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sf3b1Q99NB9 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sf3b1Q99NB9 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC12.26□□□□□ -0.45
Sf3b1Q99NB9 Gm3028-201ENSMUST00000213805 1119 ntBASIC12.26□□□□□ -0.45
Sf3b1Q99NB9 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC12.26□□□□□ -0.45
Sf3b1Q99NB9 Gm9873-201ENSMUST00000063891 1097 ntBASIC12.26□□□□□ -0.45
Sf3b1Q99NB9 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sf3b1Q99NB9 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sf3b1Q99NB9 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC12.26□□□□□ -0.45
Sf3b1Q99NB9 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sf3b1Q99NB9 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sf3b1Q99NB9 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sf3b1Q99NB9 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sf3b1Q99NB9 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sf3b1Q99NB9 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sf3b1Q99NB9 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sf3b1Q99NB9 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sf3b1Q99NB9 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sf3b1Q99NB9 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sf3b1Q99NB9 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sf3b1Q99NB9 Gm21358-201ENSMUST00000191645 1659 ntBASIC12.25□□□□□ -0.45
Sf3b1Q99NB9 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sf3b1Q99NB9 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sf3b1Q99NB9 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Sf3b1Q99NB9 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sf3b1Q99NB9 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.25□□□□□ -0.45
Sf3b1Q99NB9 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sf3b1Q99NB9 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sf3b1Q99NB9 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sf3b1Q99NB9 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sf3b1Q99NB9 Gm18642-201ENSMUST00000206642 1400 ntBASIC12.25□□□□□ -0.45
Sf3b1Q99NB9 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Sf3b1Q99NB9 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Sf3b1Q99NB9 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sf3b1Q99NB9 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Sf3b1Q99NB9 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sf3b1Q99NB9 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sf3b1Q99NB9 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sf3b1Q99NB9 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sf3b1Q99NB9 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
Sf3b1Q99NB9 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sf3b1Q99NB9 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sf3b1Q99NB9 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC12.25□□□□□ -0.45
Sf3b1Q99NB9 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sf3b1Q99NB9 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Sf3b1Q99NB9 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sf3b1Q99NB9 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sf3b1Q99NB9 Gm13937-201ENSMUST00000121000 988 ntBASIC12.25□□□□□ -0.45
Sf3b1Q99NB9 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC12.25□□□□□ -0.45
Sf3b1Q99NB9 Gm8531-201ENSMUST00000188319 893 ntBASIC12.25□□□□□ -0.45
Sf3b1Q99NB9 Gm37028-201ENSMUST00000194276 107 ntBASIC12.25□□□□□ -0.45
Sf3b1Q99NB9 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sf3b1Q99NB9 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC12.25□□□□□ -0.45
Sf3b1Q99NB9 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sf3b1Q99NB9 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC12.25□□□□□ -0.45
Sf3b1Q99NB9 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms