Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.18□□□□□ -0.46
Usp11Q99K46 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Usp11Q99K46 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC12.18□□□□□ -0.46
Usp11Q99K46 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usp11Q99K46 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Usp11Q99K46 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usp11Q99K46 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Usp11Q99K46 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
Usp11Q99K46 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usp11Q99K46 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.17□□□□□ -0.46
Usp11Q99K46 Mical2-202ENSMUST00000050149 6669 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usp11Q99K46 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usp11Q99K46 Gm45677-201ENSMUST00000209975 1341 ntBASIC12.17□□□□□ -0.46
Usp11Q99K46 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Usp11Q99K46 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Usp11Q99K46 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Usp11Q99K46 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Usp11Q99K46 Gm15711-201ENSMUST00000118889 535 ntBASIC12.17□□□□□ -0.46
Usp11Q99K46 Gm12036-201ENSMUST00000120008 530 ntBASIC12.17□□□□□ -0.46
Usp11Q99K46 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Usp11Q99K46 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Usp11Q99K46 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Usp11Q99K46 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usp11Q99K46 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
Usp11Q99K46 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC12.17□□□□□ -0.46
Usp11Q99K46 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12.17□□□□□ -0.46
Usp11Q99K46 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC12.17□□□□□ -0.46
Usp11Q99K46 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC12.17□□□□□ -0.46
Usp11Q99K46 Gm18038-201ENSMUST00000197900 485 ntBASIC12.17□□□□□ -0.46
Usp11Q99K46 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC12.17□□□□□ -0.46
Usp11Q99K46 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usp11Q99K46 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Usp11Q99K46 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Usp11Q99K46 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Usp11Q99K46 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Usp11Q99K46 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usp11Q99K46 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usp11Q99K46 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC12.17□□□□□ -0.46
Usp11Q99K46 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usp11Q99K46 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Usp11Q99K46 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usp11Q99K46 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usp11Q99K46 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usp11Q99K46 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Usp11Q99K46 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Usp11Q99K46 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usp11Q99K46 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Usp11Q99K46 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usp11Q99K46 Gm38194-201ENSMUST00000194529 2211 ntBASIC12.17□□□□□ -0.46
Usp11Q99K46 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.17□□□□□ -0.46
Usp11Q99K46 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Usp11Q99K46 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC12.16□□□□□ -0.46
Usp11Q99K46 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12.16□□□□□ -0.46
Usp11Q99K46 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp11Q99K46 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Usp11Q99K46 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
Usp11Q99K46 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Usp11Q99K46 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC12.16□□□□□ -0.46
Usp11Q99K46 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp11Q99K46 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp11Q99K46 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp11Q99K46 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.16□□□□□ -0.46
Usp11Q99K46 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp11Q99K46 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC12.16□□□□□ -0.46
Usp11Q99K46 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
Usp11Q99K46 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC12.16□□□□□ -0.46
Usp11Q99K46 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC12.16□□□□□ -0.46
Usp11Q99K46 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC12.16□□□□□ -0.46
Usp11Q99K46 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Usp11Q99K46 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Usp11Q99K46 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp11Q99K46 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC12.16□□□□□ -0.46
Usp11Q99K46 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Usp11Q99K46 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC12.16□□□□□ -0.46
Usp11Q99K46 Gm18730-201ENSMUST00000218038 343 ntBASIC12.16□□□□□ -0.46
Usp11Q99K46 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.16□□□□□ -0.46
Usp11Q99K46 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC12.16□□□□□ -0.46
Usp11Q99K46 Gm270-201ENSMUST00000223010 976 ntBASIC12.16□□□□□ -0.46
Usp11Q99K46 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp11Q99K46 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp11Q99K46 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Usp11Q99K46 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp11Q99K46 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC12.16□□□□□ -0.46
Usp11Q99K46 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Usp11Q99K46 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC12.16□□□□□ -0.46
Usp11Q99K46 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Usp11Q99K46 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp11Q99K46 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC12.16□□□□□ -0.46
Usp11Q99K46 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC12.16□□□□□ -0.46
Usp11Q99K46 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Usp11Q99K46 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp11Q99K46 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Usp11Q99K46 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Usp11Q99K46 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Usp11Q99K46 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.15□□□□□ -0.46
Usp11Q99K46 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Usp11Q99K46 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Usp11Q99K46 Gm10152-201ENSMUST00000193475 1344 ntBASIC12.15□□□□□ -0.46
Usp11Q99K46 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Usp11Q99K46 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms