Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Dctn4-202ENSMUST00000223590 1530 ntBASIC10.28□□□□□ -0.76
Thumpd1Q99J36 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Thumpd1Q99J36 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Thumpd1Q99J36 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC10.27□□□□□ -0.76
Thumpd1Q99J36 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Thumpd1Q99J36 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Thumpd1Q99J36 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Thumpd1Q99J36 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Thumpd1Q99J36 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Thumpd1Q99J36 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Thumpd1Q99J36 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Thumpd1Q99J36 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Thumpd1Q99J36 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Thumpd1Q99J36 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Thumpd1Q99J36 Gm37122-201ENSMUST00000195313 1567 ntBASIC10.27□□□□□ -0.76
Thumpd1Q99J36 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Thumpd1Q99J36 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Thumpd1Q99J36 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Thumpd1Q99J36 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Thumpd1Q99J36 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Thumpd1Q99J36 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC10.27□□□□□ -0.77
Thumpd1Q99J36 Gm25214-201ENSMUST00000104573 129 ntBASIC10.27□□□□□ -0.77
Thumpd1Q99J36 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC10.27□□□□□ -0.77
Thumpd1Q99J36 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Thumpd1Q99J36 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Thumpd1Q99J36 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC10.27□□□□□ -0.77
Thumpd1Q99J36 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC10.27□□□□□ -0.77
Thumpd1Q99J36 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
Thumpd1Q99J36 Gm26047-201ENSMUST00000157308 113 ntBASIC10.27□□□□□ -0.77
Thumpd1Q99J36 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Thumpd1Q99J36 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Thumpd1Q99J36 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC10.27□□□□□ -0.77
Thumpd1Q99J36 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Thumpd1Q99J36 Gm26956-201ENSMUST00000182176 986 ntBASIC10.27□□□□□ -0.77
Thumpd1Q99J36 Gm8565-201ENSMUST00000183259 1014 ntBASIC10.27□□□□□ -0.77
Thumpd1Q99J36 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC10.27□□□□□ -0.77
Thumpd1Q99J36 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Thumpd1Q99J36 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC10.27□□□□□ -0.77
Thumpd1Q99J36 Gm8176-201ENSMUST00000191297 1099 ntBASIC10.27□□□□□ -0.77
Thumpd1Q99J36 Gm34767-201ENSMUST00000191813 1062 ntBASIC10.27□□□□□ -0.77
Thumpd1Q99J36 Gm26047-202ENSMUST00000198840 115 ntBASIC10.27□□□□□ -0.77
Thumpd1Q99J36 AC153954.1-201ENSMUST00000216959 255 ntBASIC10.27□□□□□ -0.77
Thumpd1Q99J36 Morn2-202ENSMUST00000227729 656 ntBASIC10.27□□□□□ -0.77
Thumpd1Q99J36 AC121960.1-201ENSMUST00000227982 564 ntBASIC10.27□□□□□ -0.77
Thumpd1Q99J36 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Thumpd1Q99J36 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Thumpd1Q99J36 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Thumpd1Q99J36 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Thumpd1Q99J36 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Thumpd1Q99J36 AC131586.1-201ENSMUST00000228844 2964 ntBASIC10.27□□□□□ -0.77
Thumpd1Q99J36 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC10.27□□□□□ -0.77
Thumpd1Q99J36 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Thumpd1Q99J36 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Thumpd1Q99J36 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Thumpd1Q99J36 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Thumpd1Q99J36 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
Thumpd1Q99J36 Sez6l-205ENSMUST00000212480 5857 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Thumpd1Q99J36 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Thumpd1Q99J36 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Thumpd1Q99J36 Gm18798-201ENSMUST00000187264 1700 ntBASIC10.27□□□□□ -0.77
Thumpd1Q99J36 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC10.27□□□□□ -0.77
Thumpd1Q99J36 AC173482.6-201ENSMUST00000225889 1741 ntBASIC10.27□□□□□ -0.77
Thumpd1Q99J36 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC10.27□□□□□ -0.77
Thumpd1Q99J36 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Thumpd1Q99J36 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Thumpd1Q99J36 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Thumpd1Q99J36 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Thumpd1Q99J36 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Thumpd1Q99J36 Gm8131-201ENSMUST00000213783 1570 ntBASIC10.26□□□□□ -0.77
Thumpd1Q99J36 AC153380.1-201ENSMUST00000214959 2364 ntBASIC10.26□□□□□ -0.77
Thumpd1Q99J36 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Thumpd1Q99J36 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC10.26□□□□□ -0.77
Thumpd1Q99J36 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Thumpd1Q99J36 Gm33366-201ENSMUST00000195583 3827 ntBASIC10.26□□□□□ -0.77
Thumpd1Q99J36 Gm17244-201ENSMUST00000192482 3416 ntBASIC10.26□□□□□ -0.77
Thumpd1Q99J36 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Thumpd1Q99J36 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Thumpd1Q99J36 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Thumpd1Q99J36 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Thumpd1Q99J36 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Thumpd1Q99J36 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Thumpd1Q99J36 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Thumpd1Q99J36 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC10.26□□□□□ -0.77
Thumpd1Q99J36 Gm14660-201ENSMUST00000119809 575 ntBASIC10.26□□□□□ -0.77
Thumpd1Q99J36 Gm12129-201ENSMUST00000120104 1147 ntBASIC10.26□□□□□ -0.77
Thumpd1Q99J36 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC10.26□□□□□ -0.77
Thumpd1Q99J36 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Thumpd1Q99J36 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Thumpd1Q99J36 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Thumpd1Q99J36 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC10.26□□□□□ -0.77
Thumpd1Q99J36 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC10.26□□□□□ -0.77
Thumpd1Q99J36 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Thumpd1Q99J36 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC10.26□□□□□ -0.77
Thumpd1Q99J36 Gm17823-201ENSMUST00000217830 1006 ntBASIC10.26□□□□□ -0.77
Thumpd1Q99J36 AC102569.1-201ENSMUST00000221563 685 ntBASIC10.26□□□□□ -0.77
Thumpd1Q99J36 AC134869.4-202ENSMUST00000224350 837 ntBASIC10.26□□□□□ -0.77
Thumpd1Q99J36 Gm5455-201ENSMUST00000058710 715 ntBASIC10.26□□□□□ -0.77
Thumpd1Q99J36 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Thumpd1Q99J36 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Thumpd1Q99J36 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms