Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.1□□□□□ -0.47
Pcdha3Q91Y16 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdha3Q91Y16 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Pcdha3Q91Y16 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Pcdha3Q91Y16 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdha3Q91Y16 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdha3Q91Y16 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdha3Q91Y16 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdha3Q91Y16 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdha3Q91Y16 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdha3Q91Y16 Gm45496-201ENSMUST00000209918 2917 ntBASIC12.09□□□□□ -0.47
Pcdha3Q91Y16 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdha3Q91Y16 Gm38055-201ENSMUST00000195353 2217 ntBASIC12.09□□□□□ -0.47
Pcdha3Q91Y16 CT025681.1-201ENSMUST00000225453 1855 ntBASIC12.09□□□□□ -0.47
Pcdha3Q91Y16 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdha3Q91Y16 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdha3Q91Y16 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdha3Q91Y16 Gm6335-201ENSMUST00000118081 1194 ntBASIC12.09□□□□□ -0.47
Pcdha3Q91Y16 Gm7816-201ENSMUST00000119884 1194 ntBASIC12.09□□□□□ -0.47
Pcdha3Q91Y16 Gm15542-201ENSMUST00000121585 1194 ntBASIC12.09□□□□□ -0.47
Pcdha3Q91Y16 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Pcdha3Q91Y16 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdha3Q91Y16 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC12.09□□□□□ -0.47
Pcdha3Q91Y16 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdha3Q91Y16 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC12.09□□□□□ -0.47
Pcdha3Q91Y16 Gm28937-201ENSMUST00000185413 695 ntBASIC12.09□□□□□ -0.47
Pcdha3Q91Y16 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC12.09□□□□□ -0.47
Pcdha3Q91Y16 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC12.09□□□□□ -0.47
Pcdha3Q91Y16 Gm29400-201ENSMUST00000187208 695 ntBASIC12.09□□□□□ -0.47
Pcdha3Q91Y16 Gm28662-201ENSMUST00000188446 695 ntBASIC12.09□□□□□ -0.47
Pcdha3Q91Y16 Gm28251-201ENSMUST00000188835 695 ntBASIC12.09□□□□□ -0.47
Pcdha3Q91Y16 Gm5852-201ENSMUST00000194119 1021 ntBASIC12.09□□□□□ -0.47
Pcdha3Q91Y16 Gm37318-201ENSMUST00000194325 695 ntBASIC12.09□□□□□ -0.47
Pcdha3Q91Y16 Gm38017-201ENSMUST00000194768 695 ntBASIC12.09□□□□□ -0.47
Pcdha3Q91Y16 Gm37287-201ENSMUST00000195449 695 ntBASIC12.09□□□□□ -0.47
Pcdha3Q91Y16 Gm37793-201ENSMUST00000195548 695 ntBASIC12.09□□□□□ -0.47
Pcdha3Q91Y16 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC12.09□□□□□ -0.47
Pcdha3Q91Y16 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdha3Q91Y16 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC12.09□□□□□ -0.47
Pcdha3Q91Y16 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC12.09□□□□□ -0.47
Pcdha3Q91Y16 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdha3Q91Y16 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC12.09□□□□□ -0.47
Pcdha3Q91Y16 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdha3Q91Y16 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdha3Q91Y16 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Pcdha3Q91Y16 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdha3Q91Y16 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdha3Q91Y16 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdha3Q91Y16 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdha3Q91Y16 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC12.09□□□□□ -0.47
Pcdha3Q91Y16 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdha3Q91Y16 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Pcdha3Q91Y16 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdha3Q91Y16 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC12.09□□□□□ -0.47
Pcdha3Q91Y16 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdha3Q91Y16 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdha3Q91Y16 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Pcdha3Q91Y16 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Pcdha3Q91Y16 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Pcdha3Q91Y16 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdha3Q91Y16 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Pcdha3Q91Y16 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdha3Q91Y16 Btrc-209ENSMUST00000224478 2194 ntBASIC12.08□□□□□ -0.48
Pcdha3Q91Y16 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdha3Q91Y16 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdha3Q91Y16 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdha3Q91Y16 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC12.08□□□□□ -0.48
Pcdha3Q91Y16 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdha3Q91Y16 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Pcdha3Q91Y16 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdha3Q91Y16 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdha3Q91Y16 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdha3Q91Y16 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
Pcdha3Q91Y16 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdha3Q91Y16 Gm13916-201ENSMUST00000117368 628 ntBASIC12.08□□□□□ -0.48
Pcdha3Q91Y16 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC12.08□□□□□ -0.48
Pcdha3Q91Y16 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdha3Q91Y16 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdha3Q91Y16 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC12.08□□□□□ -0.48
Pcdha3Q91Y16 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC12.08□□□□□ -0.48
Pcdha3Q91Y16 Gm18393-201ENSMUST00000208349 1131 ntBASIC12.08□□□□□ -0.48
Pcdha3Q91Y16 Gm6108-201ENSMUST00000208365 367 ntBASIC12.08□□□□□ -0.48
Pcdha3Q91Y16 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC12.08□□□□□ -0.48
Pcdha3Q91Y16 AC122408.1-201ENSMUST00000218949 218 ntBASIC12.08□□□□□ -0.48
Pcdha3Q91Y16 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC12.08□□□□□ -0.48
Pcdha3Q91Y16 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdha3Q91Y16 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdha3Q91Y16 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdha3Q91Y16 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdha3Q91Y16 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC12.08□□□□□ -0.48
Pcdha3Q91Y16 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Pcdha3Q91Y16 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdha3Q91Y16 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdha3Q91Y16 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdha3Q91Y16 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdha3Q91Y16 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdha3Q91Y16 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdha3Q91Y16 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdha3Q91Y16 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdha3Q91Y16 Gm7841-201ENSMUST00000122108 1629 ntBASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms