Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhb6Q91XZ4 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhb6Q91XZ4 Gm13135-201ENSMUST00000117628 3121 ntBASIC11.85□□□□□ -0.51
Pcdhb6Q91XZ4 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhb6Q91XZ4 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhb6Q91XZ4 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhb6Q91XZ4 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhb6Q91XZ4 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhb6Q91XZ4 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Pcdhb6Q91XZ4 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhb6Q91XZ4 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhb6Q91XZ4 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhb6Q91XZ4 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhb6Q91XZ4 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhb6Q91XZ4 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhb6Q91XZ4 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Pcdhb6Q91XZ4 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhb6Q91XZ4 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhb6Q91XZ4 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhb6Q91XZ4 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhb6Q91XZ4 Gm43963-201ENSMUST00000203466 2488 ntBASIC11.84□□□□□ -0.51
Pcdhb6Q91XZ4 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Pcdhb6Q91XZ4 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhb6Q91XZ4 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC11.84□□□□□ -0.51
Pcdhb6Q91XZ4 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhb6Q91XZ4 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhb6Q91XZ4 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhb6Q91XZ4 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhb6Q91XZ4 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhb6Q91XZ4 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhb6Q91XZ4 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhb6Q91XZ4 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC11.84□□□□□ -0.51
Pcdhb6Q91XZ4 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhb6Q91XZ4 Mir680-2-201ENSMUST00000102163 110 ntBASIC11.84□□□□□ -0.51
Pcdhb6Q91XZ4 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Pcdhb6Q91XZ4 Gm23251-201ENSMUST00000103773 110 ntBASIC11.84□□□□□ -0.51
Pcdhb6Q91XZ4 Gm14193-201ENSMUST00000105067 153 ntBASIC11.84□□□□□ -0.51
Pcdhb6Q91XZ4 Gm6397-201ENSMUST00000161973 1069 ntBASIC11.84□□□□□ -0.51
Pcdhb6Q91XZ4 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Pcdhb6Q91XZ4 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC11.84□□□□□ -0.51
Pcdhb6Q91XZ4 Gm12407-201ENSMUST00000180219 324 ntBASIC11.84□□□□□ -0.51
Pcdhb6Q91XZ4 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhb6Q91XZ4 Mir6927-201ENSMUST00000184494 71 ntBASIC11.84□□□□□ -0.51
Pcdhb6Q91XZ4 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhb6Q91XZ4 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC11.84□□□□□ -0.51
Pcdhb6Q91XZ4 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Pcdhb6Q91XZ4 AC153961.1-201ENSMUST00000217760 385 ntBASIC11.84□□□□□ -0.51
Pcdhb6Q91XZ4 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC11.84□□□□□ -0.51
Pcdhb6Q91XZ4 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhb6Q91XZ4 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhb6Q91XZ4 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhb6Q91XZ4 Gm7551-201ENSMUST00000089593 1074 ntBASIC11.84□□□□□ -0.51
Pcdhb6Q91XZ4 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhb6Q91XZ4 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Pcdhb6Q91XZ4 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhb6Q91XZ4 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Pcdhb6Q91XZ4 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhb6Q91XZ4 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.84□□□□□ -0.51
Pcdhb6Q91XZ4 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhb6Q91XZ4 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhb6Q91XZ4 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Pcdhb6Q91XZ4 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhb6Q91XZ4 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC11.84□□□□□ -0.51
Pcdhb6Q91XZ4 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhb6Q91XZ4 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhb6Q91XZ4 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhb6Q91XZ4 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhb6Q91XZ4 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhb6Q91XZ4 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhb6Q91XZ4 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhb6Q91XZ4 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhb6Q91XZ4 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhb6Q91XZ4 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhb6Q91XZ4 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhb6Q91XZ4 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Pcdhb6Q91XZ4 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Pcdhb6Q91XZ4 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC11.83□□□□□ -0.52
Pcdhb6Q91XZ4 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhb6Q91XZ4 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhb6Q91XZ4 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhb6Q91XZ4 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhb6Q91XZ4 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhb6Q91XZ4 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhb6Q91XZ4 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhb6Q91XZ4 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhb6Q91XZ4 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhb6Q91XZ4 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Pcdhb6Q91XZ4 Gm15374-201ENSMUST00000119313 844 ntBASIC11.83□□□□□ -0.52
Pcdhb6Q91XZ4 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC11.83□□□□□ -0.52
Pcdhb6Q91XZ4 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC11.83□□□□□ -0.52
Pcdhb6Q91XZ4 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC11.83□□□□□ -0.52
Pcdhb6Q91XZ4 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhb6Q91XZ4 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhb6Q91XZ4 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhb6Q91XZ4 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC11.83□□□□□ -0.52
Pcdhb6Q91XZ4 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC11.83□□□□□ -0.52
Pcdhb6Q91XZ4 Gm42790-201ENSMUST00000201268 969 ntBASIC11.83□□□□□ -0.52
Pcdhb6Q91XZ4 Gm6905-201ENSMUST00000205729 511 ntBASIC11.83□□□□□ -0.52
Pcdhb6Q91XZ4 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhb6Q91XZ4 Gm5363-201ENSMUST00000211927 938 ntBASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms