Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC13.19□□□□□ -0.3
Trex1Q91XB0 Gm28833-201ENSMUST00000189671 559 ntBASIC13.19□□□□□ -0.3
Trex1Q91XB0 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC13.19□□□□□ -0.3
Trex1Q91XB0 Gm43671-201ENSMUST00000200422 433 ntBASIC13.19□□□□□ -0.3
Trex1Q91XB0 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trex1Q91XB0 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Trex1Q91XB0 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Trex1Q91XB0 AC154176.1-201ENSMUST00000225897 220 ntBASIC13.19□□□□□ -0.3
Trex1Q91XB0 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC13.19□□□□□ -0.3
Trex1Q91XB0 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Trex1Q91XB0 Gm43417-201ENSMUST00000201586 5207 ntBASIC13.19□□□□□ -0.3
Trex1Q91XB0 Gm37122-201ENSMUST00000195313 1567 ntBASIC13.19□□□□□ -0.3
Trex1Q91XB0 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC13.19□□□□□ -0.3
Trex1Q91XB0 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Trex1Q91XB0 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trex1Q91XB0 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Trex1Q91XB0 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trex1Q91XB0 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trex1Q91XB0 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trex1Q91XB0 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trex1Q91XB0 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trex1Q91XB0 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trex1Q91XB0 Gm28424-201ENSMUST00000187393 1319 ntBASIC13.18□□□□□ -0.3
Trex1Q91XB0 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC13.18□□□□□ -0.3
Trex1Q91XB0 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trex1Q91XB0 Gm3836-201ENSMUST00000211377 1613 ntBASIC13.18□□□□□ -0.3
Trex1Q91XB0 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trex1Q91XB0 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.18□□□□□ -0.3
Trex1Q91XB0 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC13.18□□□□□ -0.3
Trex1Q91XB0 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trex1Q91XB0 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trex1Q91XB0 Gm25053-201ENSMUST00000103982 133 ntBASIC13.18□□□□□ -0.3
Trex1Q91XB0 Gm25922-201ENSMUST00000104281 130 ntBASIC13.18□□□□□ -0.3
Trex1Q91XB0 Gm13351-201ENSMUST00000118087 414 ntBASIC13.18□□□□□ -0.3
Trex1Q91XB0 Gm8302-201ENSMUST00000119217 852 ntBASIC13.18□□□□□ -0.3
Trex1Q91XB0 Gm24679-201ENSMUST00000158762 111 ntBASIC13.18□□□□□ -0.3
Trex1Q91XB0 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC13.18□□□□□ -0.3
Trex1Q91XB0 Gm25053-202ENSMUST00000199731 132 ntBASIC13.18□□□□□ -0.3
Trex1Q91XB0 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
Trex1Q91XB0 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC13.18□□□□□ -0.3
Trex1Q91XB0 AC134248.1-201ENSMUST00000216113 1176 ntBASIC13.18□□□□□ -0.3
Trex1Q91XB0 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC13.18□□□□□ -0.3
Trex1Q91XB0 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC13.18□□□□□ -0.3
Trex1Q91XB0 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trex1Q91XB0 Gm5171-201ENSMUST00000214944 1415 ntBASIC13.18□□□□□ -0.3
Trex1Q91XB0 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC13.18□□□□□ -0.3
Trex1Q91XB0 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trex1Q91XB0 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trex1Q91XB0 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Trex1Q91XB0 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trex1Q91XB0 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trex1Q91XB0 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trex1Q91XB0 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC13.18□□□□□ -0.3
Trex1Q91XB0 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trex1Q91XB0 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trex1Q91XB0 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC13.18□□□□□ -0.3
Trex1Q91XB0 Gm43760-201ENSMUST00000202120 3015 ntBASIC13.18□□□□□ -0.3
Trex1Q91XB0 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trex1Q91XB0 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trex1Q91XB0 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trex1Q91XB0 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trex1Q91XB0 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Trex1Q91XB0 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC13.17□□□□□ -0.3
Trex1Q91XB0 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trex1Q91XB0 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
Trex1Q91XB0 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Trex1Q91XB0 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trex1Q91XB0 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trex1Q91XB0 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trex1Q91XB0 AC157950.1-201ENSMUST00000217561 2168 ntBASIC13.17□□□□□ -0.3
Trex1Q91XB0 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trex1Q91XB0 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trex1Q91XB0 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trex1Q91XB0 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trex1Q91XB0 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trex1Q91XB0 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trex1Q91XB0 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC13.17□□□□□ -0.3
Trex1Q91XB0 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trex1Q91XB0 Gm11560-201ENSMUST00000117567 948 ntBASIC13.17□□□□□ -0.3
Trex1Q91XB0 Gm13549-201ENSMUST00000118339 796 ntBASIC13.17□□□□□ -0.3
Trex1Q91XB0 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC13.17□□□□□ -0.3
Trex1Q91XB0 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC13.17□□□□□ -0.3
Trex1Q91XB0 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trex1Q91XB0 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trex1Q91XB0 Olfml3-204ENSMUST00000169286 874 ntBASIC13.17□□□□□ -0.3
Trex1Q91XB0 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC13.17□□□□□ -0.3
Trex1Q91XB0 Gm30946-201ENSMUST00000198288 724 ntBASIC13.17□□□□□ -0.3
Trex1Q91XB0 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC13.17□□□□□ -0.3
Trex1Q91XB0 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trex1Q91XB0 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC13.17□□□□□ -0.3
Trex1Q91XB0 AC154305.2-201ENSMUST00000225813 901 ntBASIC13.17□□□□□ -0.3
Trex1Q91XB0 AC154572.1-201ENSMUST00000226098 1204 ntBASIC13.17□□□□□ -0.3
Trex1Q91XB0 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trex1Q91XB0 Gm44573-201ENSMUST00000191753 2370 ntBASIC13.17□□□□□ -0.3
Trex1Q91XB0 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trex1Q91XB0 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC13.17□□□□□ -0.3
Trex1Q91XB0 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trex1Q91XB0 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC13.17□□□□□ -0.3
Trex1Q91XB0 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trex1Q91XB0 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms