Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trim60Q8VI40 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Trim60Q8VI40 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim60Q8VI40 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim60Q8VI40 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim60Q8VI40 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim60Q8VI40 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim60Q8VI40 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim60Q8VI40 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC11.92□□□□□ -0.5
Trim60Q8VI40 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Trim60Q8VI40 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC11.92□□□□□ -0.5
Trim60Q8VI40 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trim60Q8VI40 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC11.92□□□□□ -0.5
Trim60Q8VI40 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trim60Q8VI40 Gm38089-201ENSMUST00000193585 1514 ntBASIC11.92□□□□□ -0.5
Trim60Q8VI40 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim60Q8VI40 Gm43522-201ENSMUST00000196697 1922 ntBASIC11.92□□□□□ -0.5
Trim60Q8VI40 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim60Q8VI40 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trim60Q8VI40 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim60Q8VI40 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
Trim60Q8VI40 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim60Q8VI40 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim60Q8VI40 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim60Q8VI40 Gm13665-201ENSMUST00000120830 528 ntBASIC11.92□□□□□ -0.5
Trim60Q8VI40 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim60Q8VI40 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC11.92□□□□□ -0.5
Trim60Q8VI40 Gm4310-201ENSMUST00000177847 889 ntBASIC11.92□□□□□ -0.5
Trim60Q8VI40 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trim60Q8VI40 Gm27627-201ENSMUST00000183644 150 ntBASIC11.92□□□□□ -0.5
Trim60Q8VI40 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC11.92□□□□□ -0.5
Trim60Q8VI40 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim60Q8VI40 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Trim60Q8VI40 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim60Q8VI40 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Trim60Q8VI40 Gm43127-201ENSMUST00000195890 2789 ntBASIC11.92□□□□□ -0.5
Trim60Q8VI40 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim60Q8VI40 CT010447.1-201ENSMUST00000225657 1608 ntBASIC11.92□□□□□ -0.5
Trim60Q8VI40 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim60Q8VI40 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim60Q8VI40 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trim60Q8VI40 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trim60Q8VI40 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC11.92□□□□□ -0.5
Trim60Q8VI40 Gm6015-201ENSMUST00000217493 1586 ntBASIC11.92□□□□□ -0.5
Trim60Q8VI40 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.92□□□□□ -0.5
Trim60Q8VI40 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim60Q8VI40 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim60Q8VI40 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim60Q8VI40 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim60Q8VI40 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim60Q8VI40 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim60Q8VI40 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim60Q8VI40 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Trim60Q8VI40 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Trim60Q8VI40 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trim60Q8VI40 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim60Q8VI40 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim60Q8VI40 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim60Q8VI40 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim60Q8VI40 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC11.91□□□□□ -0.5
Trim60Q8VI40 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim60Q8VI40 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim60Q8VI40 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Trim60Q8VI40 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC11.91□□□□□ -0.5
Trim60Q8VI40 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC11.91□□□□□ -0.5
Trim60Q8VI40 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC11.91□□□□□ -0.5
Trim60Q8VI40 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC11.91□□□□□ -0.5
Trim60Q8VI40 Gm15207-201ENSMUST00000119259 442 ntBASIC11.91□□□□□ -0.5
Trim60Q8VI40 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trim60Q8VI40 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC11.91□□□□□ -0.5
Trim60Q8VI40 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trim60Q8VI40 Gm8856-201ENSMUST00000185254 1144 ntBASIC11.91□□□□□ -0.5
Trim60Q8VI40 AY036118-201ENSMUST00000200021 923 ntBASIC11.91□□□□□ -0.5
Trim60Q8VI40 Gm45865-201ENSMUST00000211815 945 ntBASIC11.91□□□□□ -0.5
Trim60Q8VI40 Gm9797-202ENSMUST00000218003 294 ntBASIC11.91□□□□□ -0.5
Trim60Q8VI40 AC160929.1-201ENSMUST00000221247 415 ntBASIC11.91□□□□□ -0.5
Trim60Q8VI40 Cts7-204ENSMUST00000225321 1257 ntBASIC11.91□□□□□ -0.5
Trim60Q8VI40 Rassf8-202ENSMUST00000058538 1131 ntBASIC11.91□□□□□ -0.5
Trim60Q8VI40 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim60Q8VI40 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.91□□□□□ -0.5
Trim60Q8VI40 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Trim60Q8VI40 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trim60Q8VI40 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim60Q8VI40 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.91□□□□□ -0.5
Trim60Q8VI40 Gm37122-201ENSMUST00000195313 1567 ntBASIC11.91□□□□□ -0.5
Trim60Q8VI40 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim60Q8VI40 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim60Q8VI40 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim60Q8VI40 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trim60Q8VI40 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim60Q8VI40 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim60Q8VI40 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim60Q8VI40 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim60Q8VI40 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trim60Q8VI40 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trim60Q8VI40 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim60Q8VI40 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC11.9□□□□□ -0.5
Trim60Q8VI40 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim60Q8VI40 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim60Q8VI40 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 89.1 ms