Protein–RNA interactions for Protein: Q8CGP4

Hist1h2aa, Histone H2A, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h2aaQ8CGP4 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC10.88□□□□□ -0.67
Hist1h2aaQ8CGP4 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC10.88□□□□□ -0.67
Hist1h2aaQ8CGP4 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hist1h2aaQ8CGP4 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hist1h2aaQ8CGP4 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC10.88□□□□□ -0.67
Hist1h2aaQ8CGP4 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hist1h2aaQ8CGP4 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hist1h2aaQ8CGP4 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Hist1h2aaQ8CGP4 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Hist1h2aaQ8CGP4 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hist1h2aaQ8CGP4 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Hist1h2aaQ8CGP4 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hist1h2aaQ8CGP4 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hist1h2aaQ8CGP4 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hist1h2aaQ8CGP4 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hist1h2aaQ8CGP4 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Hist1h2aaQ8CGP4 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Hist1h2aaQ8CGP4 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Hist1h2aaQ8CGP4 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Hist1h2aaQ8CGP4 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hist1h2aaQ8CGP4 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Hist1h2aaQ8CGP4 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Hist1h2aaQ8CGP4 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hist1h2aaQ8CGP4 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hist1h2aaQ8CGP4 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC10.87□□□□□ -0.67
Hist1h2aaQ8CGP4 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC10.87□□□□□ -0.67
Hist1h2aaQ8CGP4 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC10.87□□□□□ -0.67
Hist1h2aaQ8CGP4 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Hist1h2aaQ8CGP4 Gm14028-201ENSMUST00000117434 479 ntBASIC10.87□□□□□ -0.67
Hist1h2aaQ8CGP4 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC10.87□□□□□ -0.67
Hist1h2aaQ8CGP4 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
Hist1h2aaQ8CGP4 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Hist1h2aaQ8CGP4 Gm24990-201ENSMUST00000157406 323 ntBASIC10.87□□□□□ -0.67
Hist1h2aaQ8CGP4 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC10.87□□□□□ -0.67
Hist1h2aaQ8CGP4 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC10.87□□□□□ -0.67
Hist1h2aaQ8CGP4 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hist1h2aaQ8CGP4 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC10.87□□□□□ -0.67
Hist1h2aaQ8CGP4 AC151275.1-201ENSMUST00000224870 585 ntBASIC10.87□□□□□ -0.67
Hist1h2aaQ8CGP4 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hist1h2aaQ8CGP4 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hist1h2aaQ8CGP4 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Hist1h2aaQ8CGP4 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Hist1h2aaQ8CGP4 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Hist1h2aaQ8CGP4 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hist1h2aaQ8CGP4 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Hist1h2aaQ8CGP4 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hist1h2aaQ8CGP4 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hist1h2aaQ8CGP4 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hist1h2aaQ8CGP4 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hist1h2aaQ8CGP4 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hist1h2aaQ8CGP4 AC122840.1-201ENSMUST00000220915 3334 ntBASIC10.87□□□□□ -0.67
Hist1h2aaQ8CGP4 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hist1h2aaQ8CGP4 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hist1h2aaQ8CGP4 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hist1h2aaQ8CGP4 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hist1h2aaQ8CGP4 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Hist1h2aaQ8CGP4 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hist1h2aaQ8CGP4 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hist1h2aaQ8CGP4 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hist1h2aaQ8CGP4 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hist1h2aaQ8CGP4 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hist1h2aaQ8CGP4 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hist1h2aaQ8CGP4 Sipa1l3-215ENSMUST00000183096 7713 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Hist1h2aaQ8CGP4 Sipa1l3-201ENSMUST00000085809 7713 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Hist1h2aaQ8CGP4 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hist1h2aaQ8CGP4 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hist1h2aaQ8CGP4 Ankrd11-202ENSMUST00000098334 8455 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
Hist1h2aaQ8CGP4 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hist1h2aaQ8CGP4 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hist1h2aaQ8CGP4 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC10.86□□□□□ -0.67
Hist1h2aaQ8CGP4 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Hist1h2aaQ8CGP4 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC10.86□□□□□ -0.67
Hist1h2aaQ8CGP4 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Hist1h2aaQ8CGP4 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Hist1h2aaQ8CGP4 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC10.86□□□□□ -0.67
Hist1h2aaQ8CGP4 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC10.86□□□□□ -0.67
Hist1h2aaQ8CGP4 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC10.86□□□□□ -0.67
Hist1h2aaQ8CGP4 Gm27341-201ENSMUST00000183570 106 ntBASIC10.86□□□□□ -0.67
Hist1h2aaQ8CGP4 Mir8093-201ENSMUST00000185043 137 ntBASIC10.86□□□□□ -0.67
Hist1h2aaQ8CGP4 Gm5852-201ENSMUST00000194119 1021 ntBASIC10.86□□□□□ -0.67
Hist1h2aaQ8CGP4 Gm5982-201ENSMUST00000196234 512 ntBASIC10.86□□□□□ -0.67
Hist1h2aaQ8CGP4 Gm43002-201ENSMUST00000200310 155 ntBASIC10.86□□□□□ -0.67
Hist1h2aaQ8CGP4 Gm18056-201ENSMUST00000207670 568 ntBASIC10.86□□□□□ -0.67
Hist1h2aaQ8CGP4 Gm18061-201ENSMUST00000208350 562 ntBASIC10.86□□□□□ -0.67
Hist1h2aaQ8CGP4 Gm18063-201ENSMUST00000208529 568 ntBASIC10.86□□□□□ -0.67
Hist1h2aaQ8CGP4 Gm18052-201ENSMUST00000208750 559 ntBASIC10.86□□□□□ -0.67
Hist1h2aaQ8CGP4 Gm5363-201ENSMUST00000211927 938 ntBASIC10.86□□□□□ -0.67
Hist1h2aaQ8CGP4 Gm19208-201ENSMUST00000213861 912 ntBASIC10.86□□□□□ -0.67
Hist1h2aaQ8CGP4 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Hist1h2aaQ8CGP4 Gm18636-201ENSMUST00000218846 1066 ntBASIC10.86□□□□□ -0.67
Hist1h2aaQ8CGP4 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hist1h2aaQ8CGP4 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hist1h2aaQ8CGP4 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hist1h2aaQ8CGP4 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hist1h2aaQ8CGP4 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hist1h2aaQ8CGP4 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Hist1h2aaQ8CGP4 Slc7a1-201ENSMUST00000048116 7179 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hist1h2aaQ8CGP4 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hist1h2aaQ8CGP4 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hist1h2aaQ8CGP4 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms