Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Alx1Q8C8B0 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Alx1Q8C8B0 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Alx1Q8C8B0 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Alx1Q8C8B0 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Alx1Q8C8B0 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Alx1Q8C8B0 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Alx1Q8C8B0 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Alx1Q8C8B0 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Alx1Q8C8B0 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Alx1Q8C8B0 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Alx1Q8C8B0 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC13.43□□□□□ -0.26
Alx1Q8C8B0 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Alx1Q8C8B0 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Alx1Q8C8B0 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
Alx1Q8C8B0 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Alx1Q8C8B0 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC13.42□□□□□ -0.26
Alx1Q8C8B0 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Alx1Q8C8B0 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Alx1Q8C8B0 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC13.42□□□□□ -0.26
Alx1Q8C8B0 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Alx1Q8C8B0 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Alx1Q8C8B0 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Alx1Q8C8B0 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC13.42□□□□□ -0.26
Alx1Q8C8B0 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Alx1Q8C8B0 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Alx1Q8C8B0 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC13.42□□□□□ -0.26
Alx1Q8C8B0 AC167565.1-201ENSMUST00000226980 1833 ntBASIC13.42□□□□□ -0.26
Alx1Q8C8B0 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Alx1Q8C8B0 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Alx1Q8C8B0 Gm12129-201ENSMUST00000120104 1147 ntBASIC13.42□□□□□ -0.26
Alx1Q8C8B0 Gm12176-201ENSMUST00000121420 875 ntBASIC13.42□□□□□ -0.26
Alx1Q8C8B0 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC13.42□□□□□ -0.26
Alx1Q8C8B0 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Alx1Q8C8B0 Mir7076-201ENSMUST00000183519 74 ntBASIC13.42□□□□□ -0.26
Alx1Q8C8B0 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC13.42□□□□□ -0.26
Alx1Q8C8B0 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC13.42□□□□□ -0.26
Alx1Q8C8B0 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC13.42□□□□□ -0.26
Alx1Q8C8B0 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Alx1Q8C8B0 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Alx1Q8C8B0 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Alx1Q8C8B0 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Alx1Q8C8B0 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Alx1Q8C8B0 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Alx1Q8C8B0 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Alx1Q8C8B0 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Alx1Q8C8B0 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Alx1Q8C8B0 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Alx1Q8C8B0 Gm17213-201ENSMUST00000165161 1360 ntBASIC13.42□□□□□ -0.26
Alx1Q8C8B0 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Alx1Q8C8B0 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Alx1Q8C8B0 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Alx1Q8C8B0 Gm33366-201ENSMUST00000195583 3827 ntBASIC13.42□□□□□ -0.26
Alx1Q8C8B0 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Alx1Q8C8B0 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Alx1Q8C8B0 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC13.42□□□□□ -0.26
Alx1Q8C8B0 Gm43984-201ENSMUST00000204572 2864 ntBASIC13.42□□□□□ -0.26
Alx1Q8C8B0 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC13.41□□□□□ -0.26
Alx1Q8C8B0 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Alx1Q8C8B0 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Alx1Q8C8B0 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Alx1Q8C8B0 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Alx1Q8C8B0 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Alx1Q8C8B0 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Alx1Q8C8B0 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Alx1Q8C8B0 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Alx1Q8C8B0 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Alx1Q8C8B0 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Alx1Q8C8B0 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Alx1Q8C8B0 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
Alx1Q8C8B0 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Alx1Q8C8B0 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Alx1Q8C8B0 Gm13326-201ENSMUST00000118730 1011 ntBASIC13.41□□□□□ -0.26
Alx1Q8C8B0 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Alx1Q8C8B0 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Alx1Q8C8B0 Gm8197-202ENSMUST00000193422 934 ntBASIC13.41□□□□□ -0.26
Alx1Q8C8B0 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC13.41□□□□□ -0.26
Alx1Q8C8B0 Gm44126-201ENSMUST00000204831 514 ntBASIC13.41□□□□□ -0.26
Alx1Q8C8B0 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Alx1Q8C8B0 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Alx1Q8C8B0 CT485607.1-201ENSMUST00000216100 85 ntBASIC13.41□□□□□ -0.26
Alx1Q8C8B0 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Alx1Q8C8B0 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC13.41□□□□□ -0.26
Alx1Q8C8B0 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Alx1Q8C8B0 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Alx1Q8C8B0 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC13.41□□□□□ -0.26
Alx1Q8C8B0 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC13.41□□□□□ -0.26
Alx1Q8C8B0 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Alx1Q8C8B0 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Alx1Q8C8B0 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Alx1Q8C8B0 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Alx1Q8C8B0 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Alx1Q8C8B0 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Alx1Q8C8B0 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Alx1Q8C8B0 Gm44153-201ENSMUST00000204162 1580 ntBASIC13.41□□□□□ -0.26
Alx1Q8C8B0 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Alx1Q8C8B0 Gm6655-201ENSMUST00000201932 1309 ntBASIC13.4□□□□□ -0.26
Alx1Q8C8B0 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Alx1Q8C8B0 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Alx1Q8C8B0 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms