Protein–RNA interactions for Protein: Q8BU04

Ubr7, Putative E3 ubiquitin-protein ligase UBR7, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr7Q8BU04 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ubr7Q8BU04 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ubr7Q8BU04 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Ubr7Q8BU04 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ubr7Q8BU04 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ubr7Q8BU04 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ubr7Q8BU04 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC11.67□□□□□ -0.54
Ubr7Q8BU04 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC11.67□□□□□ -0.54
Ubr7Q8BU04 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ubr7Q8BU04 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ubr7Q8BU04 Gm15271-201ENSMUST00000134627 2110 ntTSL 5 BASIC11.66□□□□□ -0.54
Ubr7Q8BU04 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ubr7Q8BU04 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ubr7Q8BU04 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ubr7Q8BU04 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Ubr7Q8BU04 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ubr7Q8BU04 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ubr7Q8BU04 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Ubr7Q8BU04 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ubr7Q8BU04 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC11.66□□□□□ -0.54
Ubr7Q8BU04 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Ubr7Q8BU04 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Ubr7Q8BU04 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Ubr7Q8BU04 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC11.66□□□□□ -0.54
Ubr7Q8BU04 Gm5778-201ENSMUST00000171003 1072 ntBASIC11.66□□□□□ -0.54
Ubr7Q8BU04 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
Ubr7Q8BU04 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC11.66□□□□□ -0.54
Ubr7Q8BU04 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC11.66□□□□□ -0.54
Ubr7Q8BU04 Gm37826-201ENSMUST00000195329 322 ntBASIC11.66□□□□□ -0.54
Ubr7Q8BU04 Gm2875-201ENSMUST00000211333 360 ntBASIC11.66□□□□□ -0.54
Ubr7Q8BU04 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ubr7Q8BU04 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ubr7Q8BU04 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ubr7Q8BU04 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ubr7Q8BU04 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.66□□□□□ -0.54
Ubr7Q8BU04 Gm44755-201ENSMUST00000207830 2102 ntBASIC11.66□□□□□ -0.54
Ubr7Q8BU04 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC11.66□□□□□ -0.54
Ubr7Q8BU04 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ubr7Q8BU04 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Ubr7Q8BU04 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ubr7Q8BU04 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ubr7Q8BU04 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ubr7Q8BU04 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ubr7Q8BU04 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Ubr7Q8BU04 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Ubr7Q8BU04 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ubr7Q8BU04 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Ubr7Q8BU04 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ubr7Q8BU04 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC11.65□□□□□ -0.54
Ubr7Q8BU04 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Ubr7Q8BU04 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ubr7Q8BU04 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.65□□□□□ -0.54
Ubr7Q8BU04 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ubr7Q8BU04 Gm13384-201ENSMUST00000117166 1344 ntBASIC11.65□□□□□ -0.54
Ubr7Q8BU04 Gm28424-201ENSMUST00000187393 1319 ntBASIC11.65□□□□□ -0.54
Ubr7Q8BU04 Gm6655-201ENSMUST00000201932 1309 ntBASIC11.65□□□□□ -0.54
Ubr7Q8BU04 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Ubr7Q8BU04 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.65□□□□□ -0.54
Ubr7Q8BU04 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ubr7Q8BU04 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ubr7Q8BU04 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ubr7Q8BU04 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ubr7Q8BU04 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ubr7Q8BU04 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ubr7Q8BU04 Gm43221-201ENSMUST00000197612 2071 ntBASIC11.65□□□□□ -0.54
Ubr7Q8BU04 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC11.65□□□□□ -0.54
Ubr7Q8BU04 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Ubr7Q8BU04 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Ubr7Q8BU04 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC11.65□□□□□ -0.54
Ubr7Q8BU04 Gm29067-201ENSMUST00000190821 470 ntBASIC11.65□□□□□ -0.54
Ubr7Q8BU04 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Ubr7Q8BU04 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ubr7Q8BU04 Gm45856-201ENSMUST00000212752 416 ntBASIC11.65□□□□□ -0.54
Ubr7Q8BU04 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC11.65□□□□□ -0.54
Ubr7Q8BU04 CT030170.2-201ENSMUST00000223267 126 ntBASIC11.65□□□□□ -0.54
Ubr7Q8BU04 CT010506.1-201ENSMUST00000223673 349 ntBASIC11.65□□□□□ -0.54
Ubr7Q8BU04 Gm5468-202ENSMUST00000227851 682 ntBASIC11.65□□□□□ -0.54
Ubr7Q8BU04 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Ubr7Q8BU04 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Ubr7Q8BU04 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ubr7Q8BU04 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ubr7Q8BU04 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Ubr7Q8BU04 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC11.65□□□□□ -0.54
Ubr7Q8BU04 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.65□□□□□ -0.54
Ubr7Q8BU04 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ubr7Q8BU04 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ubr7Q8BU04 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Ubr7Q8BU04 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ubr7Q8BU04 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.55
Ubr7Q8BU04 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Ubr7Q8BU04 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Ubr7Q8BU04 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Ubr7Q8BU04 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Ubr7Q8BU04 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Ubr7Q8BU04 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ubr7Q8BU04 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ubr7Q8BU04 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Ubr7Q8BU04 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ubr7Q8BU04 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Ubr7Q8BU04 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms