Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 n-R5s117-201ENSMUST00000179431 119 ntBASIC12.96□□□□□ -0.33
Trnp1Q80ZI1 Gm25212-201ENSMUST00000179432 119 ntBASIC12.96□□□□□ -0.33
Trnp1Q80ZI1 n-R5s138-201ENSMUST00000179476 119 ntBASIC12.96□□□□□ -0.33
Trnp1Q80ZI1 n-R5s122-201ENSMUST00000179500 119 ntBASIC12.96□□□□□ -0.33
Trnp1Q80ZI1 n-R5s143-201ENSMUST00000179542 119 ntBASIC12.96□□□□□ -0.33
Trnp1Q80ZI1 n-R5s107-201ENSMUST00000179704 119 ntBASIC12.96□□□□□ -0.33
Trnp1Q80ZI1 Gm26391-201ENSMUST00000179843 119 ntBASIC12.96□□□□□ -0.33
Trnp1Q80ZI1 n-R5s110-201ENSMUST00000179995 119 ntBASIC12.96□□□□□ -0.33
Trnp1Q80ZI1 n-R5s128-201ENSMUST00000180096 119 ntBASIC12.96□□□□□ -0.33
Trnp1Q80ZI1 n-R5s124-201ENSMUST00000180334 119 ntBASIC12.96□□□□□ -0.33
Trnp1Q80ZI1 Gm27440-201ENSMUST00000184785 107 ntBASIC12.96□□□□□ -0.33
Trnp1Q80ZI1 Gm43244-201ENSMUST00000196994 1285 ntBASIC12.96□□□□□ -0.33
Trnp1Q80ZI1 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Trnp1Q80ZI1 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Trnp1Q80ZI1 Gm45481-201ENSMUST00000209717 877 ntBASIC12.96□□□□□ -0.33
Trnp1Q80ZI1 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC12.96□□□□□ -0.33
Trnp1Q80ZI1 Nkain2-205ENSMUST00000219125 1166 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trnp1Q80ZI1 AC129975.1-201ENSMUST00000224816 592 ntBASIC12.96□□□□□ -0.33
Trnp1Q80ZI1 Cma1-202ENSMUST00000226280 1090 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.33
Trnp1Q80ZI1 Cma1-201ENSMUST00000022834 1074 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trnp1Q80ZI1 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trnp1Q80ZI1 Gm24089-201ENSMUST00000093696 109 ntBASIC12.96□□□□□ -0.33
Trnp1Q80ZI1 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Trnp1Q80ZI1 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.96□□□□□ -0.33
Trnp1Q80ZI1 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Trnp1Q80ZI1 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trnp1Q80ZI1 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Trnp1Q80ZI1 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trnp1Q80ZI1 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trnp1Q80ZI1 AC022682.1-201ENSMUST00000224624 2023 ntBASIC12.96□□□□□ -0.34
Trnp1Q80ZI1 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trnp1Q80ZI1 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trnp1Q80ZI1 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trnp1Q80ZI1 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trnp1Q80ZI1 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trnp1Q80ZI1 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC12.96□□□□□ -0.34
Trnp1Q80ZI1 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trnp1Q80ZI1 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trnp1Q80ZI1 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trnp1Q80ZI1 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trnp1Q80ZI1 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trnp1Q80ZI1 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.95□□□□□ -0.34
Trnp1Q80ZI1 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trnp1Q80ZI1 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trnp1Q80ZI1 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trnp1Q80ZI1 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.95□□□□□ -0.34
Trnp1Q80ZI1 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trnp1Q80ZI1 Gm6641-201ENSMUST00000196100 1315 ntBASIC12.95□□□□□ -0.34
Trnp1Q80ZI1 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC12.95□□□□□ -0.34
Trnp1Q80ZI1 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trnp1Q80ZI1 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trnp1Q80ZI1 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trnp1Q80ZI1 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trnp1Q80ZI1 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trnp1Q80ZI1 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trnp1Q80ZI1 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trnp1Q80ZI1 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trnp1Q80ZI1 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trnp1Q80ZI1 B2m-201ENSMUST00000102476 860 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trnp1Q80ZI1 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Trnp1Q80ZI1 1700112K13Rik-201ENSMUST00000141892 701 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trnp1Q80ZI1 Gm3329-201ENSMUST00000159873 556 ntBASIC12.95□□□□□ -0.34
Trnp1Q80ZI1 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trnp1Q80ZI1 Gm17190-202ENSMUST00000185178 1074 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Trnp1Q80ZI1 Plet1os-202ENSMUST00000190941 1119 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trnp1Q80ZI1 Ndufc1-204ENSMUST00000193279 315 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
Trnp1Q80ZI1 Gm8234-201ENSMUST00000198523 1107 ntBASIC12.95□□□□□ -0.34
Trnp1Q80ZI1 Gm18123-201ENSMUST00000210874 822 ntBASIC12.95□□□□□ -0.34
Trnp1Q80ZI1 AC154589.2-201ENSMUST00000228847 251 ntBASIC12.95□□□□□ -0.34
Trnp1Q80ZI1 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trnp1Q80ZI1 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Trnp1Q80ZI1 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trnp1Q80ZI1 Gm10580-201ENSMUST00000097985 396 ntBASIC12.95□□□□□ -0.34
Trnp1Q80ZI1 Gm10582-201ENSMUST00000097987 396 ntBASIC12.95□□□□□ -0.34
Trnp1Q80ZI1 Gm10583-201ENSMUST00000097988 396 ntBASIC12.95□□□□□ -0.34
Trnp1Q80ZI1 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trnp1Q80ZI1 Eef1akmt4-202ENSMUST00000119224 1464 ntTSL 2 BASIC12.95□□□□□ -0.34
Trnp1Q80ZI1 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trnp1Q80ZI1 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trnp1Q80ZI1 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trnp1Q80ZI1 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trnp1Q80ZI1 Gm43167-201ENSMUST00000202001 1606 ntBASIC12.95□□□□□ -0.34
Trnp1Q80ZI1 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trnp1Q80ZI1 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trnp1Q80ZI1 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trnp1Q80ZI1 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Trnp1Q80ZI1 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trnp1Q80ZI1 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trnp1Q80ZI1 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trnp1Q80ZI1 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trnp1Q80ZI1 Gm42970-201ENSMUST00000196407 1352 ntBASIC12.94□□□□□ -0.34
Trnp1Q80ZI1 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC12.94□□□□□ -0.34
Trnp1Q80ZI1 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trnp1Q80ZI1 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trnp1Q80ZI1 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trnp1Q80ZI1 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trnp1Q80ZI1 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
Trnp1Q80ZI1 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.94□□□□□ -0.34
Trnp1Q80ZI1 Grk3-204ENSMUST00000197888 1938 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trnp1Q80ZI1 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms