Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ccdc116Q80X53 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Ccdc116Q80X53 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.34□□□□□ -0.59
Ccdc116Q80X53 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Ccdc116Q80X53 Adgrv1-214ENSMUST00000224088 1492 ntBASIC11.34□□□□□ -0.59
Ccdc116Q80X53 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ccdc116Q80X53 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ccdc116Q80X53 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ccdc116Q80X53 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ccdc116Q80X53 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ccdc116Q80X53 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Ccdc116Q80X53 Gm20495-201ENSMUST00000173902 235 ntBASIC11.34□□□□□ -0.59
Ccdc116Q80X53 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC11.34□□□□□ -0.59
Ccdc116Q80X53 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC11.34□□□□□ -0.59
Ccdc116Q80X53 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC11.34□□□□□ -0.59
Ccdc116Q80X53 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC11.34□□□□□ -0.59
Ccdc116Q80X53 Rps4l-202ENSMUST00000204242 789 ntBASIC11.34□□□□□ -0.59
Ccdc116Q80X53 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC11.34□□□□□ -0.59
Ccdc116Q80X53 CT485787.1-201ENSMUST00000225617 968 ntBASIC11.34□□□□□ -0.59
Ccdc116Q80X53 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ccdc116Q80X53 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Ccdc116Q80X53 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Ccdc116Q80X53 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ccdc116Q80X53 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ccdc116Q80X53 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ccdc116Q80X53 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ccdc116Q80X53 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Ccdc116Q80X53 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Ccdc116Q80X53 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC11.34□□□□□ -0.59
Ccdc116Q80X53 Gm38089-201ENSMUST00000193585 1514 ntBASIC11.34□□□□□ -0.59
Ccdc116Q80X53 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Ccdc116Q80X53 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ccdc116Q80X53 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Ccdc116Q80X53 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ccdc116Q80X53 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ccdc116Q80X53 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ccdc116Q80X53 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ccdc116Q80X53 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ccdc116Q80X53 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC11.33□□□□□ -0.59
Ccdc116Q80X53 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Ccdc116Q80X53 Gm38140-201ENSMUST00000193617 2755 ntBASIC11.33□□□□□ -0.59
Ccdc116Q80X53 Gm13135-201ENSMUST00000117628 3121 ntBASIC11.33□□□□□ -0.6
Ccdc116Q80X53 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccdc116Q80X53 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Ccdc116Q80X53 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
Ccdc116Q80X53 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccdc116Q80X53 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccdc116Q80X53 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccdc116Q80X53 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccdc116Q80X53 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccdc116Q80X53 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC11.33□□□□□ -0.6
Ccdc116Q80X53 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccdc116Q80X53 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Ccdc116Q80X53 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccdc116Q80X53 Gm29358-202ENSMUST00000187941 3227 ntBASIC11.33□□□□□ -0.6
Ccdc116Q80X53 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC11.33□□□□□ -0.6
Ccdc116Q80X53 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC11.33□□□□□ -0.6
Ccdc116Q80X53 Gm8566-201ENSMUST00000120174 465 ntBASIC11.33□□□□□ -0.6
Ccdc116Q80X53 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccdc116Q80X53 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC11.33□□□□□ -0.6
Ccdc116Q80X53 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC11.33□□□□□ -0.6
Ccdc116Q80X53 Gm16505-201ENSMUST00000179981 232 ntBASIC11.33□□□□□ -0.6
Ccdc116Q80X53 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ccdc116Q80X53 Gm5714-201ENSMUST00000197343 566 ntBASIC11.33□□□□□ -0.6
Ccdc116Q80X53 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccdc116Q80X53 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC11.33□□□□□ -0.6
Ccdc116Q80X53 AC151275.1-201ENSMUST00000224870 585 ntBASIC11.33□□□□□ -0.6
Ccdc116Q80X53 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccdc116Q80X53 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ccdc116Q80X53 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccdc116Q80X53 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccdc116Q80X53 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccdc116Q80X53 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
Ccdc116Q80X53 Gm45199-201ENSMUST00000207640 1507 ntBASIC11.33□□□□□ -0.6
Ccdc116Q80X53 Gm13910-201ENSMUST00000121752 1428 ntBASIC11.33□□□□□ -0.6
Ccdc116Q80X53 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccdc116Q80X53 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccdc116Q80X53 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ccdc116Q80X53 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccdc116Q80X53 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccdc116Q80X53 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccdc116Q80X53 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ccdc116Q80X53 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ccdc116Q80X53 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ccdc116Q80X53 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.32□□□□□ -0.6
Ccdc116Q80X53 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccdc116Q80X53 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ccdc116Q80X53 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccdc116Q80X53 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ccdc116Q80X53 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ccdc116Q80X53 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ccdc116Q80X53 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ccdc116Q80X53 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccdc116Q80X53 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Ccdc116Q80X53 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ccdc116Q80X53 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccdc116Q80X53 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccdc116Q80X53 Gm11783-201ENSMUST00000119549 885 ntBASIC11.32□□□□□ -0.6
Ccdc116Q80X53 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ccdc116Q80X53 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms