Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ubfd1Q78JW9 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ubfd1Q78JW9 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ubfd1Q78JW9 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ubfd1Q78JW9 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC11.28□□□□□ -0.6
Ubfd1Q78JW9 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ubfd1Q78JW9 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Ubfd1Q78JW9 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ubfd1Q78JW9 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ubfd1Q78JW9 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ubfd1Q78JW9 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ubfd1Q78JW9 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ubfd1Q78JW9 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ubfd1Q78JW9 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Ubfd1Q78JW9 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ubfd1Q78JW9 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.27□□□□□ -0.6
Ubfd1Q78JW9 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ubfd1Q78JW9 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Ubfd1Q78JW9 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.27□□□□□ -0.6
Ubfd1Q78JW9 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ubfd1Q78JW9 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ubfd1Q78JW9 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ubfd1Q78JW9 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ubfd1Q78JW9 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ubfd1Q78JW9 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ubfd1Q78JW9 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ubfd1Q78JW9 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC11.27□□□□□ -0.61
Ubfd1Q78JW9 Gm15549-201ENSMUST00000121595 622 ntBASIC11.27□□□□□ -0.61
Ubfd1Q78JW9 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ubfd1Q78JW9 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ubfd1Q78JW9 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ubfd1Q78JW9 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC11.27□□□□□ -0.61
Ubfd1Q78JW9 Gm44329-201ENSMUST00000197469 112 ntBASIC11.27□□□□□ -0.61
Ubfd1Q78JW9 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ubfd1Q78JW9 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ubfd1Q78JW9 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Ubfd1Q78JW9 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Ubfd1Q78JW9 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Ubfd1Q78JW9 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ubfd1Q78JW9 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ubfd1Q78JW9 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ubfd1Q78JW9 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ubfd1Q78JW9 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.27□□□□□ -0.61
Ubfd1Q78JW9 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ubfd1Q78JW9 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ubfd1Q78JW9 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Ubfd1Q78JW9 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ubfd1Q78JW9 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ubfd1Q78JW9 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ubfd1Q78JW9 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ubfd1Q78JW9 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ubfd1Q78JW9 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ubfd1Q78JW9 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ubfd1Q78JW9 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ubfd1Q78JW9 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ubfd1Q78JW9 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ubfd1Q78JW9 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ubfd1Q78JW9 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ubfd1Q78JW9 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ubfd1Q78JW9 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.26□□□□□ -0.61
Ubfd1Q78JW9 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC11.26□□□□□ -0.61
Ubfd1Q78JW9 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ubfd1Q78JW9 Mir1901-201ENSMUST00000122616 78 ntBASIC11.26□□□□□ -0.61
Ubfd1Q78JW9 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC11.26□□□□□ -0.61
Ubfd1Q78JW9 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC11.26□□□□□ -0.61
Ubfd1Q78JW9 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC11.26□□□□□ -0.61
Ubfd1Q78JW9 Gm22442-201ENSMUST00000157256 144 ntBASIC11.26□□□□□ -0.61
Ubfd1Q78JW9 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ubfd1Q78JW9 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ubfd1Q78JW9 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ubfd1Q78JW9 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC11.26□□□□□ -0.61
Ubfd1Q78JW9 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
Ubfd1Q78JW9 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC11.26□□□□□ -0.61
Ubfd1Q78JW9 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC11.26□□□□□ -0.61
Ubfd1Q78JW9 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ubfd1Q78JW9 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ubfd1Q78JW9 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Ubfd1Q78JW9 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ubfd1Q78JW9 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ubfd1Q78JW9 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ubfd1Q78JW9 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ubfd1Q78JW9 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.26□□□□□ -0.61
Ubfd1Q78JW9 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ubfd1Q78JW9 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ubfd1Q78JW9 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ubfd1Q78JW9 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC11.26□□□□□ -0.61
Ubfd1Q78JW9 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC11.26□□□□□ -0.61
Ubfd1Q78JW9 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ubfd1Q78JW9 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Ubfd1Q78JW9 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ubfd1Q78JW9 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ubfd1Q78JW9 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ubfd1Q78JW9 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.25□□□□□ -0.61
Ubfd1Q78JW9 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Ubfd1Q78JW9 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Ubfd1Q78JW9 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ubfd1Q78JW9 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Ubfd1Q78JW9 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Ubfd1Q78JW9 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Ubfd1Q78JW9 Gm25766-201ENSMUST00000104101 131 ntBASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 84 ms