Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Scaf4Q6PFF0 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Scaf4Q6PFF0 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Scaf4Q6PFF0 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Scaf4Q6PFF0 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Scaf4Q6PFF0 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Scaf4Q6PFF0 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Scaf4Q6PFF0 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Scaf4Q6PFF0 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Scaf4Q6PFF0 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Scaf4Q6PFF0 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC11.37□□□□□ -0.59
Scaf4Q6PFF0 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Scaf4Q6PFF0 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Scaf4Q6PFF0 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Scaf4Q6PFF0 Gm44369-201ENSMUST00000204543 2175 ntBASIC11.37□□□□□ -0.59
Scaf4Q6PFF0 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Scaf4Q6PFF0 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Scaf4Q6PFF0 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Scaf4Q6PFF0 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC11.37□□□□□ -0.59
Scaf4Q6PFF0 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Scaf4Q6PFF0 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Scaf4Q6PFF0 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Scaf4Q6PFF0 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC11.36□□□□□ -0.59
Scaf4Q6PFF0 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Scaf4Q6PFF0 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Scaf4Q6PFF0 Gm37422-201ENSMUST00000193794 4718 ntBASIC11.36□□□□□ -0.59
Scaf4Q6PFF0 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Scaf4Q6PFF0 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Scaf4Q6PFF0 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Scaf4Q6PFF0 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Scaf4Q6PFF0 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Scaf4Q6PFF0 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Scaf4Q6PFF0 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Scaf4Q6PFF0 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC11.36□□□□□ -0.59
Scaf4Q6PFF0 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Scaf4Q6PFF0 AC169511.2-201ENSMUST00000226674 2063 ntBASIC11.36□□□□□ -0.59
Scaf4Q6PFF0 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Scaf4Q6PFF0 Gm10548-201ENSMUST00000097631 2629 ntBASIC11.36□□□□□ -0.59
Scaf4Q6PFF0 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC11.36□□□□□ -0.59
Scaf4Q6PFF0 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC11.36□□□□□ -0.59
Scaf4Q6PFF0 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Scaf4Q6PFF0 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Scaf4Q6PFF0 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Scaf4Q6PFF0 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Scaf4Q6PFF0 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Scaf4Q6PFF0 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC11.36□□□□□ -0.59
Scaf4Q6PFF0 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC11.36□□□□□ -0.59
Scaf4Q6PFF0 Gm3096-201ENSMUST00000185770 364 ntBASIC11.36□□□□□ -0.59
Scaf4Q6PFF0 Gm30285-201ENSMUST00000214614 422 ntBASIC11.36□□□□□ -0.59
Scaf4Q6PFF0 Gm7293-201ENSMUST00000216682 1007 ntBASIC11.36□□□□□ -0.59
Scaf4Q6PFF0 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Scaf4Q6PFF0 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Scaf4Q6PFF0 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Scaf4Q6PFF0 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC11.36□□□□□ -0.59
Scaf4Q6PFF0 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Scaf4Q6PFF0 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Scaf4Q6PFF0 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Scaf4Q6PFF0 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Scaf4Q6PFF0 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Scaf4Q6PFF0 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Scaf4Q6PFF0 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Scaf4Q6PFF0 AC123619.2-202ENSMUST00000225097 1568 ntBASIC11.36□□□□□ -0.59
Scaf4Q6PFF0 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Scaf4Q6PFF0 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Scaf4Q6PFF0 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC11.36□□□□□ -0.59
Scaf4Q6PFF0 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Scaf4Q6PFF0 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Scaf4Q6PFF0 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Scaf4Q6PFF0 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Scaf4Q6PFF0 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC11.35□□□□□ -0.59
Scaf4Q6PFF0 Gm18798-201ENSMUST00000187264 1700 ntBASIC11.35□□□□□ -0.59
Scaf4Q6PFF0 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC11.35□□□□□ -0.59
Scaf4Q6PFF0 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
Scaf4Q6PFF0 Gm10699-201ENSMUST00000098916 2130 ntBASIC11.35□□□□□ -0.59
Scaf4Q6PFF0 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Scaf4Q6PFF0 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Scaf4Q6PFF0 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Scaf4Q6PFF0 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Scaf4Q6PFF0 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Scaf4Q6PFF0 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Scaf4Q6PFF0 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Scaf4Q6PFF0 Gm12129-201ENSMUST00000120104 1147 ntBASIC11.35□□□□□ -0.59
Scaf4Q6PFF0 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Scaf4Q6PFF0 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Scaf4Q6PFF0 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC11.35□□□□□ -0.59
Scaf4Q6PFF0 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Scaf4Q6PFF0 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Scaf4Q6PFF0 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Scaf4Q6PFF0 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC11.35□□□□□ -0.59
Scaf4Q6PFF0 Gm37489-201ENSMUST00000191883 159 ntBASIC11.35□□□□□ -0.59
Scaf4Q6PFF0 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Scaf4Q6PFF0 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC11.35□□□□□ -0.59
Scaf4Q6PFF0 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Scaf4Q6PFF0 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Scaf4Q6PFF0 Gm10608-202ENSMUST00000213924 676 ntBASIC11.35□□□□□ -0.59
Scaf4Q6PFF0 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC11.35□□□□□ -0.59
Scaf4Q6PFF0 Gm5186-201ENSMUST00000218781 920 ntBASIC11.35□□□□□ -0.59
Scaf4Q6PFF0 Olfr1347-205ENSMUST00000220413 964 ntBASIC11.35□□□□□ -0.59
Scaf4Q6PFF0 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Scaf4Q6PFF0 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms