Protein–RNA interactions for Protein: Q6PEE2

Ctif, CBP80/20-dependent translation initiation factor, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtifQ6PEE2 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
CtifQ6PEE2 Gm12957-201ENSMUST00000117835 377 ntBASIC12.27□□□□□ -0.45
CtifQ6PEE2 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.27□□□□□ -0.45
CtifQ6PEE2 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.45
CtifQ6PEE2 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CtifQ6PEE2 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.27□□□□□ -0.45
CtifQ6PEE2 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
CtifQ6PEE2 Gm8463-201ENSMUST00000208573 613 ntBASIC12.27□□□□□ -0.45
CtifQ6PEE2 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CtifQ6PEE2 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
CtifQ6PEE2 Gm8036-201ENSMUST00000118089 1718 ntBASIC12.27□□□□□ -0.45
CtifQ6PEE2 Gabrr2-201ENSMUST00000024035 1820 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CtifQ6PEE2 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CtifQ6PEE2 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CtifQ6PEE2 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CtifQ6PEE2 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CtifQ6PEE2 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CtifQ6PEE2 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC12.27□□□□□ -0.45
CtifQ6PEE2 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CtifQ6PEE2 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
CtifQ6PEE2 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
CtifQ6PEE2 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CtifQ6PEE2 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CtifQ6PEE2 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CtifQ6PEE2 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CtifQ6PEE2 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
CtifQ6PEE2 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
CtifQ6PEE2 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
CtifQ6PEE2 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CtifQ6PEE2 Gm10417-201ENSMUST00000194341 3522 ntBASIC12.26□□□□□ -0.45
CtifQ6PEE2 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CtifQ6PEE2 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CtifQ6PEE2 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CtifQ6PEE2 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
CtifQ6PEE2 Syt15-201ENSMUST00000035351 3623 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
CtifQ6PEE2 Serpina3g-201ENSMUST00000043315 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CtifQ6PEE2 Olfr1219-203ENSMUST00000214442 3694 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
CtifQ6PEE2 N4bp2l1-205ENSMUST00000202031 1864 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CtifQ6PEE2 St5-203ENSMUST00000084738 3161 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
CtifQ6PEE2 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
CtifQ6PEE2 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.26□□□□□ -0.45
CtifQ6PEE2 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.26□□□□□ -0.45
CtifQ6PEE2 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC12.26□□□□□ -0.45
CtifQ6PEE2 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.26□□□□□ -0.45
CtifQ6PEE2 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.26□□□□□ -0.45
CtifQ6PEE2 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CtifQ6PEE2 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CtifQ6PEE2 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.26□□□□□ -0.45
CtifQ6PEE2 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CtifQ6PEE2 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
CtifQ6PEE2 Mir6392-201ENSMUST00000184924 108 ntBASIC12.26□□□□□ -0.45
CtifQ6PEE2 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12.26□□□□□ -0.45
CtifQ6PEE2 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.26□□□□□ -0.45
CtifQ6PEE2 AC155286.1-201ENSMUST00000218632 448 ntBASIC12.26□□□□□ -0.45
CtifQ6PEE2 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CtifQ6PEE2 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CtifQ6PEE2 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CtifQ6PEE2 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
CtifQ6PEE2 Gm21817-201ENSMUST00000178584 2583 ntBASIC12.26□□□□□ -0.45
CtifQ6PEE2 Nectin4-203ENSMUST00000111286 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CtifQ6PEE2 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CtifQ6PEE2 Anks1b-216ENSMUST00000182430 3305 ntTSL 5 BASIC12.26□□□□□ -0.45
CtifQ6PEE2 Txnrd1-201ENSMUST00000020484 3325 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CtifQ6PEE2 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CtifQ6PEE2 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CtifQ6PEE2 2410004P03Rik-201ENSMUST00000095823 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CtifQ6PEE2 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CtifQ6PEE2 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC12.26□□□□□ -0.45
CtifQ6PEE2 Speer4b-201ENSMUST00000053257 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CtifQ6PEE2 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CtifQ6PEE2 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CtifQ6PEE2 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CtifQ6PEE2 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CtifQ6PEE2 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CtifQ6PEE2 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
CtifQ6PEE2 Gm19040-201ENSMUST00000203280 4726 ntBASIC12.26□□□□□ -0.45
CtifQ6PEE2 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CtifQ6PEE2 Slc7a3-202ENSMUST00000101362 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CtifQ6PEE2 AC165148.1-201ENSMUST00000224795 2372 ntBASIC12.26□□□□□ -0.45
CtifQ6PEE2 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CtifQ6PEE2 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
CtifQ6PEE2 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CtifQ6PEE2 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
CtifQ6PEE2 Gm11298-201ENSMUST00000120503 1799 ntBASIC12.25□□□□□ -0.45
CtifQ6PEE2 Ttll9-201ENSMUST00000099197 1797 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CtifQ6PEE2 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
CtifQ6PEE2 Henmt1-203ENSMUST00000106586 1838 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CtifQ6PEE2 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CtifQ6PEE2 Rab27a-201ENSMUST00000034722 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CtifQ6PEE2 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CtifQ6PEE2 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CtifQ6PEE2 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CtifQ6PEE2 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC12.25□□□□□ -0.45
CtifQ6PEE2 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
CtifQ6PEE2 Mical1-201ENSMUST00000019967 3563 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CtifQ6PEE2 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CtifQ6PEE2 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
CtifQ6PEE2 Gm8876-201ENSMUST00000120768 1122 ntBASIC12.25□□□□□ -0.45
CtifQ6PEE2 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
CtifQ6PEE2 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms