Protein–RNA interactions for Protein: Q6PDY0

Ccdc85b, Coiled-coil domain-containing protein 85B, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85bQ6PDY0 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc85bQ6PDY0 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC12.09□□□□□ -0.47
Ccdc85bQ6PDY0 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc85bQ6PDY0 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc85bQ6PDY0 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.09□□□□□ -0.47
Ccdc85bQ6PDY0 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Ccdc85bQ6PDY0 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Ccdc85bQ6PDY0 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Ccdc85bQ6PDY0 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.08□□□□□ -0.47
Ccdc85bQ6PDY0 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Ccdc85bQ6PDY0 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.08□□□□□ -0.47
Ccdc85bQ6PDY0 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc85bQ6PDY0 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc85bQ6PDY0 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc85bQ6PDY0 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc85bQ6PDY0 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.08□□□□□ -0.48
Ccdc85bQ6PDY0 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.08□□□□□ -0.48
Ccdc85bQ6PDY0 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc85bQ6PDY0 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc85bQ6PDY0 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc85bQ6PDY0 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc85bQ6PDY0 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc85bQ6PDY0 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.08□□□□□ -0.48
Ccdc85bQ6PDY0 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc85bQ6PDY0 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc85bQ6PDY0 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Ccdc85bQ6PDY0 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc85bQ6PDY0 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc85bQ6PDY0 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc85bQ6PDY0 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc85bQ6PDY0 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc85bQ6PDY0 Gm15982-201ENSMUST00000121681 554 ntBASIC12.08□□□□□ -0.48
Ccdc85bQ6PDY0 Gm12000-201ENSMUST00000132007 629 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc85bQ6PDY0 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc85bQ6PDY0 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC12.08□□□□□ -0.48
Ccdc85bQ6PDY0 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC12.08□□□□□ -0.48
Ccdc85bQ6PDY0 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Ccdc85bQ6PDY0 Gm33707-201ENSMUST00000195135 569 ntBASIC12.08□□□□□ -0.48
Ccdc85bQ6PDY0 Gm7238-201ENSMUST00000206467 973 ntBASIC12.08□□□□□ -0.48
Ccdc85bQ6PDY0 Gm18123-201ENSMUST00000210874 822 ntBASIC12.08□□□□□ -0.48
Ccdc85bQ6PDY0 Abracl-203ENSMUST00000218994 425 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Ccdc85bQ6PDY0 Nkain2-205ENSMUST00000219125 1166 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc85bQ6PDY0 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Ccdc85bQ6PDY0 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Ccdc85bQ6PDY0 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc85bQ6PDY0 Gm8181-201ENSMUST00000062242 669 ntBASIC12.08□□□□□ -0.48
Ccdc85bQ6PDY0 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC12.08□□□□□ -0.48
Ccdc85bQ6PDY0 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc85bQ6PDY0 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc85bQ6PDY0 Pck2-205ENSMUST00000226352 2784 ntBASIC12.08□□□□□ -0.48
Ccdc85bQ6PDY0 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc85bQ6PDY0 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc85bQ6PDY0 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Ccdc85bQ6PDY0 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc85bQ6PDY0 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Ccdc85bQ6PDY0 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc85bQ6PDY0 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc85bQ6PDY0 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc85bQ6PDY0 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc85bQ6PDY0 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Ccdc85bQ6PDY0 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC12.08□□□□□ -0.48
Ccdc85bQ6PDY0 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc85bQ6PDY0 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.08□□□□□ -0.48
Ccdc85bQ6PDY0 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc85bQ6PDY0 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc85bQ6PDY0 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Ccdc85bQ6PDY0 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC12.07□□□□□ -0.48
Ccdc85bQ6PDY0 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc85bQ6PDY0 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc85bQ6PDY0 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc85bQ6PDY0 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc85bQ6PDY0 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc85bQ6PDY0 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc85bQ6PDY0 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc85bQ6PDY0 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Ccdc85bQ6PDY0 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc85bQ6PDY0 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc85bQ6PDY0 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Ccdc85bQ6PDY0 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc85bQ6PDY0 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc85bQ6PDY0 Gm13422-201ENSMUST00000118834 504 ntBASIC12.07□□□□□ -0.48
Ccdc85bQ6PDY0 Gm12461-201ENSMUST00000120231 1239 ntBASIC12.07□□□□□ -0.48
Ccdc85bQ6PDY0 Mir1905-201ENSMUST00000122779 82 ntBASIC12.07□□□□□ -0.48
Ccdc85bQ6PDY0 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC12.07□□□□□ -0.48
Ccdc85bQ6PDY0 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc85bQ6PDY0 1700112K13Rik-201ENSMUST00000141892 701 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc85bQ6PDY0 Mir432-201ENSMUST00000157230 75 ntBASIC12.07□□□□□ -0.48
Ccdc85bQ6PDY0 Gm8459-201ENSMUST00000162504 760 ntBASIC12.07□□□□□ -0.48
Ccdc85bQ6PDY0 Gm17221-201ENSMUST00000163909 481 ntBASIC12.07□□□□□ -0.48
Ccdc85bQ6PDY0 Gm17073-201ENSMUST00000168069 556 ntBASIC12.07□□□□□ -0.48
Ccdc85bQ6PDY0 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Ccdc85bQ6PDY0 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc85bQ6PDY0 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.07□□□□□ -0.48
Ccdc85bQ6PDY0 Gm2345-201ENSMUST00000193451 589 ntBASIC12.07□□□□□ -0.48
Ccdc85bQ6PDY0 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Ccdc85bQ6PDY0 Gm5907-202ENSMUST00000210969 661 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc85bQ6PDY0 Atp5s-204ENSMUST00000220916 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc85bQ6PDY0 AC154759.1-201ENSMUST00000224137 1159 ntBASIC12.07□□□□□ -0.48
Ccdc85bQ6PDY0 CT009527.1-201ENSMUST00000224205 339 ntBASIC12.07□□□□□ -0.48
Ccdc85bQ6PDY0 AC125117.2-201ENSMUST00000228344 1140 ntBASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms