Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rnf220Q6PDX6 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC10.93□□□□□ -0.66
Rnf220Q6PDX6 Gm12314-201ENSMUST00000118104 538 ntBASIC10.93□□□□□ -0.66
Rnf220Q6PDX6 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC10.93□□□□□ -0.66
Rnf220Q6PDX6 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC10.93□□□□□ -0.66
Rnf220Q6PDX6 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC10.93□□□□□ -0.66
Rnf220Q6PDX6 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC10.93□□□□□ -0.66
Rnf220Q6PDX6 Gm18584-201ENSMUST00000203098 964 ntBASIC10.93□□□□□ -0.66
Rnf220Q6PDX6 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rnf220Q6PDX6 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Rnf220Q6PDX6 AC153974.2-201ENSMUST00000218577 1025 ntBASIC10.93□□□□□ -0.66
Rnf220Q6PDX6 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rnf220Q6PDX6 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Rnf220Q6PDX6 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rnf220Q6PDX6 Btrc-206ENSMUST00000224102 3037 ntBASIC10.93□□□□□ -0.66
Rnf220Q6PDX6 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Rnf220Q6PDX6 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rnf220Q6PDX6 Cxcr2-201ENSMUST00000027372 2220 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Rnf220Q6PDX6 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rnf220Q6PDX6 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rnf220Q6PDX6 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rnf220Q6PDX6 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rnf220Q6PDX6 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC10.93□□□□□ -0.66
Rnf220Q6PDX6 AC167022.1-201ENSMUST00000218647 1458 ntBASIC10.93□□□□□ -0.66
Rnf220Q6PDX6 Gm44755-201ENSMUST00000207830 2102 ntBASIC10.93□□□□□ -0.66
Rnf220Q6PDX6 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rnf220Q6PDX6 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rnf220Q6PDX6 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC10.92□□□□□ -0.66
Rnf220Q6PDX6 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Rnf220Q6PDX6 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC10.92□□□□□ -0.66
Rnf220Q6PDX6 Prkcd-208ENSMUST00000112211 2851 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Rnf220Q6PDX6 Snd1-201ENSMUST00000001460 3482 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rnf220Q6PDX6 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Rnf220Q6PDX6 A630052C17Rik-201ENSMUST00000129876 2203 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Rnf220Q6PDX6 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rnf220Q6PDX6 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Rnf220Q6PDX6 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC10.92□□□□□ -0.66
Rnf220Q6PDX6 CT009601.1-201ENSMUST00000225567 2705 ntBASIC10.92□□□□□ -0.66
Rnf220Q6PDX6 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Rnf220Q6PDX6 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rnf220Q6PDX6 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Rnf220Q6PDX6 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rnf220Q6PDX6 Gm4034-201ENSMUST00000187674 480 ntBASIC10.92□□□□□ -0.66
Rnf220Q6PDX6 Gm18304-201ENSMUST00000189162 546 ntBASIC10.92□□□□□ -0.66
Rnf220Q6PDX6 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC10.92□□□□□ -0.66
Rnf220Q6PDX6 Gm43818-201ENSMUST00000200605 466 ntBASIC10.92□□□□□ -0.66
Rnf220Q6PDX6 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC10.92□□□□□ -0.66
Rnf220Q6PDX6 Gm4935-201ENSMUST00000221316 1198 ntBASIC10.92□□□□□ -0.66
Rnf220Q6PDX6 Gm807-202ENSMUST00000224929 408 ntBASIC10.92□□□□□ -0.66
Rnf220Q6PDX6 A1cf-201ENSMUST00000075838 2989 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rnf220Q6PDX6 Gm22058-201ENSMUST00000083393 310 ntBASIC10.92□□□□□ -0.66
Rnf220Q6PDX6 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rnf220Q6PDX6 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rnf220Q6PDX6 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rnf220Q6PDX6 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rnf220Q6PDX6 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Rnf220Q6PDX6 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Rnf220Q6PDX6 Mdm1-203ENSMUST00000164077 2922 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rnf220Q6PDX6 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rnf220Q6PDX6 Adcy4-201ENSMUST00000002398 3444 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rnf220Q6PDX6 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rnf220Q6PDX6 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rnf220Q6PDX6 Pex26-203ENSMUST00000120066 3861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rnf220Q6PDX6 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Rnf220Q6PDX6 D030055H07Rik-202ENSMUST00000150953 4325 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Rnf220Q6PDX6 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rnf220Q6PDX6 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC10.92□□□□□ -0.66
Rnf220Q6PDX6 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rnf220Q6PDX6 Scnn1a-201ENSMUST00000081440 3499 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rnf220Q6PDX6 Golm1-201ENSMUST00000022039 3954 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rnf220Q6PDX6 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rnf220Q6PDX6 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rnf220Q6PDX6 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rnf220Q6PDX6 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Rnf220Q6PDX6 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rnf220Q6PDX6 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Rnf220Q6PDX6 Smyd1-202ENSMUST00000114186 3292 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Rnf220Q6PDX6 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rnf220Q6PDX6 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rnf220Q6PDX6 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rnf220Q6PDX6 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rnf220Q6PDX6 Gm40557-201ENSMUST00000220782 2736 ntTSL 5 BASIC10.91□□□□□ -0.66
Rnf220Q6PDX6 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rnf220Q6PDX6 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC10.91□□□□□ -0.66
Rnf220Q6PDX6 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rnf220Q6PDX6 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rnf220Q6PDX6 Gm9431-201ENSMUST00000119765 1051 ntBASIC10.91□□□□□ -0.66
Rnf220Q6PDX6 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Rnf220Q6PDX6 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Rnf220Q6PDX6 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC10.91□□□□□ -0.66
Rnf220Q6PDX6 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC10.91□□□□□ -0.66
Rnf220Q6PDX6 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Rnf220Q6PDX6 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Rnf220Q6PDX6 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Rnf220Q6PDX6 Gm38230-201ENSMUST00000193572 1159 ntBASIC10.91□□□□□ -0.66
Rnf220Q6PDX6 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Rnf220Q6PDX6 Gm5904-201ENSMUST00000210286 865 ntBASIC10.91□□□□□ -0.66
Rnf220Q6PDX6 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rnf220Q6PDX6 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rnf220Q6PDX6 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms