Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Casc4Q6P2L7 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Casc4Q6P2L7 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Casc4Q6P2L7 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
Casc4Q6P2L7 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Casc4Q6P2L7 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Casc4Q6P2L7 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Casc4Q6P2L7 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Casc4Q6P2L7 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Casc4Q6P2L7 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC11.72□□□□□ -0.53
Casc4Q6P2L7 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Casc4Q6P2L7 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Casc4Q6P2L7 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Casc4Q6P2L7 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Casc4Q6P2L7 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Casc4Q6P2L7 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Casc4Q6P2L7 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Casc4Q6P2L7 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Casc4Q6P2L7 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Casc4Q6P2L7 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Casc4Q6P2L7 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Casc4Q6P2L7 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Casc4Q6P2L7 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Casc4Q6P2L7 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Casc4Q6P2L7 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC11.71□□□□□ -0.53
Casc4Q6P2L7 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Casc4Q6P2L7 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Casc4Q6P2L7 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Casc4Q6P2L7 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.53
Casc4Q6P2L7 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Casc4Q6P2L7 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC11.71□□□□□ -0.53
Casc4Q6P2L7 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC11.71□□□□□ -0.53
Casc4Q6P2L7 Gm12566-201ENSMUST00000121479 359 ntBASIC11.71□□□□□ -0.53
Casc4Q6P2L7 Gm11960-201ENSMUST00000122068 925 ntBASIC11.71□□□□□ -0.53
Casc4Q6P2L7 Rn7s1-201ENSMUST00000174924 300 ntBASIC11.71□□□□□ -0.53
Casc4Q6P2L7 Rn7s2-201ENSMUST00000175032 300 ntBASIC11.71□□□□□ -0.53
Casc4Q6P2L7 Gm26461-201ENSMUST00000175064 290 ntBASIC11.71□□□□□ -0.53
Casc4Q6P2L7 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC11.71□□□□□ -0.53
Casc4Q6P2L7 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC11.71□□□□□ -0.53
Casc4Q6P2L7 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Casc4Q6P2L7 Gm5714-201ENSMUST00000197343 566 ntBASIC11.71□□□□□ -0.53
Casc4Q6P2L7 Gm43378-201ENSMUST00000199336 582 ntBASIC11.71□□□□□ -0.53
Casc4Q6P2L7 Gm6108-201ENSMUST00000208365 367 ntBASIC11.71□□□□□ -0.53
Casc4Q6P2L7 Ntng1-201ENSMUST00000051253 327 ntBASIC11.71□□□□□ -0.53
Casc4Q6P2L7 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Casc4Q6P2L7 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Casc4Q6P2L7 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Casc4Q6P2L7 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Casc4Q6P2L7 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Casc4Q6P2L7 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Casc4Q6P2L7 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Casc4Q6P2L7 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Casc4Q6P2L7 Gm9129-201ENSMUST00000218173 1689 ntBASIC11.71□□□□□ -0.54
Casc4Q6P2L7 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Casc4Q6P2L7 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Casc4Q6P2L7 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC11.71□□□□□ -0.54
Casc4Q6P2L7 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Casc4Q6P2L7 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC11.71□□□□□ -0.54
Casc4Q6P2L7 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Casc4Q6P2L7 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Casc4Q6P2L7 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Casc4Q6P2L7 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Casc4Q6P2L7 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Casc4Q6P2L7 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Casc4Q6P2L7 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Casc4Q6P2L7 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Casc4Q6P2L7 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Casc4Q6P2L7 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Casc4Q6P2L7 Gm13910-201ENSMUST00000121752 1428 ntBASIC11.7□□□□□ -0.54
Casc4Q6P2L7 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC11.7□□□□□ -0.54
Casc4Q6P2L7 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Casc4Q6P2L7 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Casc4Q6P2L7 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Casc4Q6P2L7 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Casc4Q6P2L7 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.7□□□□□ -0.54
Casc4Q6P2L7 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Casc4Q6P2L7 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Casc4Q6P2L7 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC11.7□□□□□ -0.54
Casc4Q6P2L7 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Casc4Q6P2L7 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC11.7□□□□□ -0.54
Casc4Q6P2L7 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Casc4Q6P2L7 Gm45677-201ENSMUST00000209975 1341 ntBASIC11.7□□□□□ -0.54
Casc4Q6P2L7 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Casc4Q6P2L7 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Casc4Q6P2L7 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Casc4Q6P2L7 Mir680-2-201ENSMUST00000102163 110 ntBASIC11.7□□□□□ -0.54
Casc4Q6P2L7 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Casc4Q6P2L7 Gm23251-201ENSMUST00000103773 110 ntBASIC11.7□□□□□ -0.54
Casc4Q6P2L7 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Casc4Q6P2L7 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Casc4Q6P2L7 Gm23699-201ENSMUST00000158835 135 ntBASIC11.7□□□□□ -0.54
Casc4Q6P2L7 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC11.7□□□□□ -0.54
Casc4Q6P2L7 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Casc4Q6P2L7 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
Casc4Q6P2L7 Mir6979-201ENSMUST00000183927 56 ntBASIC11.7□□□□□ -0.54
Casc4Q6P2L7 Gm18827-201ENSMUST00000188341 790 ntBASIC11.7□□□□□ -0.54
Casc4Q6P2L7 Gm9555-201ENSMUST00000200908 583 ntBASIC11.7□□□□□ -0.54
Casc4Q6P2L7 Gm7940-201ENSMUST00000218195 769 ntBASIC11.7□□□□□ -0.54
Casc4Q6P2L7 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Casc4Q6P2L7 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms