Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC11.01□□□□□ -0.65
Nr1h4Q60641 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC11.01□□□□□ -0.65
Nr1h4Q60641 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Nr1h4Q60641 Mir1982-201ENSMUST00000157368 74 ntBASIC11.01□□□□□ -0.65
Nr1h4Q60641 Gm3096-201ENSMUST00000185770 364 ntBASIC11.01□□□□□ -0.65
Nr1h4Q60641 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Nr1h4Q60641 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC11.01□□□□□ -0.65
Nr1h4Q60641 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nr1h4Q60641 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nr1h4Q60641 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nr1h4Q60641 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Nr1h4Q60641 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nr1h4Q60641 Gmps-201ENSMUST00000029405 8105 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nr1h4Q60641 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nr1h4Q60641 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nr1h4Q60641 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Nr1h4Q60641 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nr1h4Q60641 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nr1h4Q60641 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nr1h4Q60641 AC165351.1-201ENSMUST00000219078 2020 ntBASIC11.01□□□□□ -0.65
Nr1h4Q60641 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Nr1h4Q60641 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nr1h4Q60641 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nr1h4Q60641 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Nr1h4Q60641 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
Nr1h4Q60641 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Nr1h4Q60641 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nr1h4Q60641 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Nr1h4Q60641 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nr1h4Q60641 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC11□□□□□ -0.65
Nr1h4Q60641 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nr1h4Q60641 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nr1h4Q60641 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nr1h4Q60641 Gm44745-201ENSMUST00000206563 2723 ntBASIC11□□□□□ -0.65
Nr1h4Q60641 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
Nr1h4Q60641 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
Nr1h4Q60641 Gm11222-201ENSMUST00000119005 738 ntBASIC11□□□□□ -0.65
Nr1h4Q60641 Gm15004-201ENSMUST00000119192 630 ntBASIC11□□□□□ -0.65
Nr1h4Q60641 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC11□□□□□ -0.65
Nr1h4Q60641 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC11□□□□□ -0.65
Nr1h4Q60641 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC11□□□□□ -0.65
Nr1h4Q60641 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC11□□□□□ -0.65
Nr1h4Q60641 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC11□□□□□ -0.65
Nr1h4Q60641 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC11□□□□□ -0.65
Nr1h4Q60641 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Nr1h4Q60641 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nr1h4Q60641 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC11□□□□□ -0.65
Nr1h4Q60641 Gm43966-201ENSMUST00000203301 612 ntBASIC11□□□□□ -0.65
Nr1h4Q60641 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC11□□□□□ -0.65
Nr1h4Q60641 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nr1h4Q60641 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nr1h4Q60641 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nr1h4Q60641 Dyrk1a-203ENSMUST00000122284 2356 ntTSL 5 BASIC11□□□□□ -0.65
Nr1h4Q60641 AC154352.1-201ENSMUST00000221477 2365 ntBASIC11□□□□□ -0.65
Nr1h4Q60641 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nr1h4Q60641 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Nr1h4Q60641 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Nr1h4Q60641 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC11□□□□□ -0.65
Nr1h4Q60641 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC11□□□□□ -0.65
Nr1h4Q60641 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Nr1h4Q60641 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC11□□□□□ -0.65
Nr1h4Q60641 Gm42141-201ENSMUST00000196534 2172 ntBASIC11□□□□□ -0.65
Nr1h4Q60641 Btrc-209ENSMUST00000224478 2194 ntBASIC11□□□□□ -0.65
Nr1h4Q60641 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11□□□□□ -0.65
Nr1h4Q60641 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nr1h4Q60641 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nr1h4Q60641 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nr1h4Q60641 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nr1h4Q60641 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Nr1h4Q60641 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Nr1h4Q60641 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Nr1h4Q60641 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nr1h4Q60641 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Nr1h4Q60641 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Nr1h4Q60641 Nav2-204ENSMUST00000183659 7765 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Nr1h4Q60641 Peg3-201ENSMUST00000051209 8694 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nr1h4Q60641 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
Nr1h4Q60641 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nr1h4Q60641 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC10.99□□□□□ -0.65
Nr1h4Q60641 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nr1h4Q60641 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nr1h4Q60641 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Nr1h4Q60641 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nr1h4Q60641 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nr1h4Q60641 Zdbf2-201ENSMUST00000029025 12112 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nr1h4Q60641 Gm3294-201ENSMUST00000164104 7367 ntTSL 3 BASIC10.99□□□□□ -0.65
Nr1h4Q60641 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Nr1h4Q60641 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Nr1h4Q60641 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Nr1h4Q60641 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nr1h4Q60641 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nr1h4Q60641 Flna-201ENSMUST00000033699 8312 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Nr1h4Q60641 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC10.99□□□□□ -0.65
Nr1h4Q60641 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC10.99□□□□□ -0.65
Nr1h4Q60641 Gm11424-201ENSMUST00000121929 829 ntBASIC10.99□□□□□ -0.65
Nr1h4Q60641 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Nr1h4Q60641 Gm6548-201ENSMUST00000167498 1165 ntBASIC10.99□□□□□ -0.65
Nr1h4Q60641 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Nr1h4Q60641 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC10.99□□□□□ -0.65
Nr1h4Q60641 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms