Protein–RNA interactions for Protein: Q3V079

Bbof1, Basal body-orientation factor 1, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bbof1Q3V079 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Bbof1Q3V079 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Bbof1Q3V079 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Bbof1Q3V079 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC12.7□□□□□ -0.38
Bbof1Q3V079 Gm21027-201ENSMUST00000219300 1236 ntBASIC12.7□□□□□ -0.38
Bbof1Q3V079 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Bbof1Q3V079 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Bbof1Q3V079 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC12.7□□□□□ -0.38
Bbof1Q3V079 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.7□□□□□ -0.38
Bbof1Q3V079 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Bbof1Q3V079 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC12.7□□□□□ -0.38
Bbof1Q3V079 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC12.7□□□□□ -0.38
Bbof1Q3V079 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC12.7□□□□□ -0.38
Bbof1Q3V079 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Bbof1Q3V079 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Bbof1Q3V079 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
Bbof1Q3V079 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Bbof1Q3V079 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.7□□□□□ -0.38
Bbof1Q3V079 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Bbof1Q3V079 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Bbof1Q3V079 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC12.69□□□□□ -0.38
Bbof1Q3V079 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Bbof1Q3V079 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Bbof1Q3V079 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Bbof1Q3V079 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Bbof1Q3V079 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Bbof1Q3V079 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Bbof1Q3V079 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Bbof1Q3V079 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Bbof1Q3V079 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Bbof1Q3V079 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Bbof1Q3V079 Gm10548-201ENSMUST00000097631 2629 ntBASIC12.69□□□□□ -0.38
Bbof1Q3V079 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Bbof1Q3V079 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Bbof1Q3V079 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Bbof1Q3V079 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Bbof1Q3V079 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Bbof1Q3V079 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Bbof1Q3V079 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC12.69□□□□□ -0.38
Bbof1Q3V079 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
Bbof1Q3V079 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Bbof1Q3V079 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC12.69□□□□□ -0.38
Bbof1Q3V079 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Bbof1Q3V079 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC12.69□□□□□ -0.38
Bbof1Q3V079 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Bbof1Q3V079 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC12.69□□□□□ -0.38
Bbof1Q3V079 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Bbof1Q3V079 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Bbof1Q3V079 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Bbof1Q3V079 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Bbof1Q3V079 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Bbof1Q3V079 Gm43963-201ENSMUST00000203466 2488 ntBASIC12.69□□□□□ -0.38
Bbof1Q3V079 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.69□□□□□ -0.38
Bbof1Q3V079 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Bbof1Q3V079 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Bbof1Q3V079 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Bbof1Q3V079 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Bbof1Q3V079 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
Bbof1Q3V079 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Bbof1Q3V079 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC12.68□□□□□ -0.38
Bbof1Q3V079 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Bbof1Q3V079 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Bbof1Q3V079 Gm45532-201ENSMUST00000210342 3620 ntBASIC12.68□□□□□ -0.38
Bbof1Q3V079 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Bbof1Q3V079 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
Bbof1Q3V079 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Bbof1Q3V079 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Bbof1Q3V079 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Bbof1Q3V079 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Bbof1Q3V079 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Bbof1Q3V079 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Bbof1Q3V079 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Bbof1Q3V079 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Bbof1Q3V079 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
Bbof1Q3V079 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC12.68□□□□□ -0.38
Bbof1Q3V079 Gm12501-201ENSMUST00000119163 529 ntBASIC12.68□□□□□ -0.38
Bbof1Q3V079 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Bbof1Q3V079 Gm12196-201ENSMUST00000120954 262 ntBASIC12.68□□□□□ -0.38
Bbof1Q3V079 Gm6039-201ENSMUST00000121667 1250 ntBASIC12.68□□□□□ -0.38
Bbof1Q3V079 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Bbof1Q3V079 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Bbof1Q3V079 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Bbof1Q3V079 Gm3332-201ENSMUST00000189337 928 ntBASIC12.68□□□□□ -0.38
Bbof1Q3V079 AC133602.1-201ENSMUST00000227510 509 ntBASIC12.68□□□□□ -0.38
Bbof1Q3V079 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Bbof1Q3V079 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Bbof1Q3V079 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Bbof1Q3V079 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC12.68□□□□□ -0.38
Bbof1Q3V079 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Bbof1Q3V079 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Bbof1Q3V079 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.68□□□□□ -0.38
Bbof1Q3V079 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Bbof1Q3V079 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Bbof1Q3V079 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Bbof1Q3V079 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Bbof1Q3V079 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Bbof1Q3V079 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
Bbof1Q3V079 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Bbof1Q3V079 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Bbof1Q3V079 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms