Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col9a2Q07643 Rubie-203ENSMUST00000227803 2430 ntBASIC12.49□□□□□ -0.41
Col9a2Q07643 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col9a2Q07643 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col9a2Q07643 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col9a2Q07643 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Col9a2Q07643 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col9a2Q07643 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.49□□□□□ -0.41
Col9a2Q07643 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col9a2Q07643 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col9a2Q07643 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col9a2Q07643 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Col9a2Q07643 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Col9a2Q07643 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col9a2Q07643 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col9a2Q07643 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col9a2Q07643 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Col9a2Q07643 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col9a2Q07643 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col9a2Q07643 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col9a2Q07643 Gm28424-201ENSMUST00000187393 1319 ntBASIC12.48□□□□□ -0.41
Col9a2Q07643 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC12.48□□□□□ -0.41
Col9a2Q07643 Gm12948-201ENSMUST00000119406 682 ntBASIC12.48□□□□□ -0.41
Col9a2Q07643 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC12.48□□□□□ -0.41
Col9a2Q07643 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col9a2Q07643 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC12.48□□□□□ -0.41
Col9a2Q07643 Mir3060-201ENSMUST00000175339 83 ntBASIC12.48□□□□□ -0.41
Col9a2Q07643 Gm3671-201ENSMUST00000182463 1007 ntBASIC12.48□□□□□ -0.41
Col9a2Q07643 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC12.48□□□□□ -0.41
Col9a2Q07643 Gm44323-201ENSMUST00000198689 129 ntBASIC12.48□□□□□ -0.41
Col9a2Q07643 Gm43610-201ENSMUST00000199117 365 ntBASIC12.48□□□□□ -0.41
Col9a2Q07643 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC12.48□□□□□ -0.41
Col9a2Q07643 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Col9a2Q07643 Gm44755-201ENSMUST00000207830 2102 ntBASIC12.48□□□□□ -0.41
Col9a2Q07643 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC12.48□□□□□ -0.41
Col9a2Q07643 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC12.48□□□□□ -0.41
Col9a2Q07643 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Col9a2Q07643 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC12.48□□□□□ -0.41
Col9a2Q07643 Gm18968-201ENSMUST00000221319 862 ntBASIC12.48□□□□□ -0.41
Col9a2Q07643 CT030170.2-201ENSMUST00000223267 126 ntBASIC12.48□□□□□ -0.41
Col9a2Q07643 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Col9a2Q07643 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col9a2Q07643 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col9a2Q07643 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col9a2Q07643 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Col9a2Q07643 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col9a2Q07643 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Col9a2Q07643 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col9a2Q07643 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC12.48□□□□□ -0.41
Col9a2Q07643 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col9a2Q07643 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col9a2Q07643 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col9a2Q07643 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col9a2Q07643 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Col9a2Q07643 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col9a2Q07643 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Col9a2Q07643 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.47□□□□□ -0.41
Col9a2Q07643 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Col9a2Q07643 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col9a2Q07643 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Col9a2Q07643 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Col9a2Q07643 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Col9a2Q07643 Gm5171-201ENSMUST00000214944 1415 ntBASIC12.47□□□□□ -0.41
Col9a2Q07643 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col9a2Q07643 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Col9a2Q07643 AC158636.1-201ENSMUST00000220118 1393 ntBASIC12.47□□□□□ -0.41
Col9a2Q07643 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Col9a2Q07643 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col9a2Q07643 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col9a2Q07643 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC12.47□□□□□ -0.41
Col9a2Q07643 Gm30946-201ENSMUST00000198288 724 ntBASIC12.47□□□□□ -0.41
Col9a2Q07643 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Col9a2Q07643 Gm44008-201ENSMUST00000204345 412 ntBASIC12.47□□□□□ -0.41
Col9a2Q07643 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Col9a2Q07643 AC164618.2-201ENSMUST00000224770 573 ntBASIC12.47□□□□□ -0.41
Col9a2Q07643 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Col9a2Q07643 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Col9a2Q07643 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col9a2Q07643 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Col9a2Q07643 Gm18294-201ENSMUST00000176980 1748 ntBASIC12.47□□□□□ -0.41
Col9a2Q07643 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC12.47□□□□□ -0.41
Col9a2Q07643 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col9a2Q07643 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col9a2Q07643 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col9a2Q07643 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col9a2Q07643 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Col9a2Q07643 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col9a2Q07643 Gm37931-201ENSMUST00000194686 2866 ntBASIC12.47□□□□□ -0.41
Col9a2Q07643 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col9a2Q07643 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col9a2Q07643 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col9a2Q07643 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.47□□□□□ -0.41
Col9a2Q07643 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col9a2Q07643 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col9a2Q07643 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Col9a2Q07643 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col9a2Q07643 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Col9a2Q07643 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col9a2Q07643 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col9a2Q07643 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms