Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Gm39091-201ENSMUST00000206189 553 ntTSL 2 BASIC11.76□□□□□ -0.53
Col9a1Q05722 4930402F11Rik-201ENSMUST00000207348 1000 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Col9a1Q05722 Gm44716-201ENSMUST00000209007 710 ntBASIC11.76□□□□□ -0.53
Col9a1Q05722 Rnf212-206ENSMUST00000212212 924 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Col9a1Q05722 Gm30671-201ENSMUST00000214898 318 ntBASIC11.76□□□□□ -0.53
Col9a1Q05722 Gm46349-201ENSMUST00000219678 917 ntTSL 5 BASIC11.76□□□□□ -0.53
Col9a1Q05722 AC153936.1-201ENSMUST00000219874 395 ntBASIC11.76□□□□□ -0.53
Col9a1Q05722 AC154219.1-201ENSMUST00000220764 1262 ntBASIC11.76□□□□□ -0.53
Col9a1Q05722 AC164556.1-201ENSMUST00000221318 751 ntBASIC11.76□□□□□ -0.53
Col9a1Q05722 Cacna2d3-208ENSMUST00000225985 918 ntBASIC11.76□□□□□ -0.53
Col9a1Q05722 Cxcl10-201ENSMUST00000038816 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col9a1Q05722 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Col9a1Q05722 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC11.76□□□□□ -0.53
Col9a1Q05722 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Col9a1Q05722 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col9a1Q05722 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Col9a1Q05722 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col9a1Q05722 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col9a1Q05722 Olfr181-201ENSMUST00000075361 1391 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Col9a1Q05722 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col9a1Q05722 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col9a1Q05722 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col9a1Q05722 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Col9a1Q05722 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col9a1Q05722 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC11.76□□□□□ -0.53
Col9a1Q05722 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col9a1Q05722 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC11.76□□□□□ -0.53
Col9a1Q05722 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC11.76□□□□□ -0.53
Col9a1Q05722 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col9a1Q05722 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col9a1Q05722 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col9a1Q05722 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col9a1Q05722 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col9a1Q05722 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Col9a1Q05722 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC11.75□□□□□ -0.53
Col9a1Q05722 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Col9a1Q05722 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col9a1Q05722 Gm28386-201ENSMUST00000189147 1849 ntBASIC11.75□□□□□ -0.53
Col9a1Q05722 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col9a1Q05722 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col9a1Q05722 B2m-201ENSMUST00000102476 860 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col9a1Q05722 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC11.75□□□□□ -0.53
Col9a1Q05722 Gm24934-201ENSMUST00000103764 111 ntBASIC11.75□□□□□ -0.53
Col9a1Q05722 Gm11255-201ENSMUST00000120448 1180 ntBASIC11.75□□□□□ -0.53
Col9a1Q05722 Gm13134-201ENSMUST00000132106 738 ntTSL 3 BASIC11.75□□□□□ -0.53
Col9a1Q05722 Xbp1-204ENSMUST00000149623 897 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
Col9a1Q05722 Gm15699-201ENSMUST00000159213 280 ntTSL 5 BASIC11.75□□□□□ -0.53
Col9a1Q05722 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC11.75□□□□□ -0.53
Col9a1Q05722 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC11.75□□□□□ -0.53
Col9a1Q05722 Gm3307-201ENSMUST00000176164 632 ntBASIC11.75□□□□□ -0.53
Col9a1Q05722 Vmn2r-ps9-201ENSMUST00000177446 1099 ntBASIC11.75□□□□□ -0.53
Col9a1Q05722 Gm5624-202ENSMUST00000178184 492 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Col9a1Q05722 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Col9a1Q05722 1700125H20Rik-201ENSMUST00000018623 966 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col9a1Q05722 Gm37727-201ENSMUST00000191637 819 ntBASIC11.75□□□□□ -0.53
Col9a1Q05722 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Col9a1Q05722 Gm43117-201ENSMUST00000198531 379 ntBASIC11.75□□□□□ -0.53
Col9a1Q05722 Gm9523-201ENSMUST00000199146 1159 ntBASIC11.75□□□□□ -0.53
Col9a1Q05722 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC11.75□□□□□ -0.53
Col9a1Q05722 Olfr209-202ENSMUST00000208246 428 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Col9a1Q05722 Gm7972-201ENSMUST00000208434 1137 ntBASIC11.75□□□□□ -0.53
Col9a1Q05722 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.75□□□□□ -0.53
Col9a1Q05722 AC127302.1-201ENSMUST00000215973 1111 ntBASIC11.75□□□□□ -0.53
Col9a1Q05722 Cyp3a61-ps1-201ENSMUST00000218470 592 ntBASIC11.75□□□□□ -0.53
Col9a1Q05722 AC163354.2-201ENSMUST00000221741 649 ntTSL 3 BASIC11.75□□□□□ -0.53
Col9a1Q05722 Gm36862-204ENSMUST00000223365 642 ntTSL 3 BASIC11.75□□□□□ -0.53
Col9a1Q05722 AC154417.1-201ENSMUST00000223876 476 ntBASIC11.75□□□□□ -0.53
Col9a1Q05722 Zfp934-201ENSMUST00000082203 993 ntTSL 5 BASIC11.75□□□□□ -0.53
Col9a1Q05722 Olfr1313-201ENSMUST00000099599 938 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Col9a1Q05722 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Col9a1Q05722 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Col9a1Q05722 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col9a1Q05722 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.75□□□□□ -0.53
Col9a1Q05722 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Col9a1Q05722 H2-M10.1-201ENSMUST00000025322 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col9a1Q05722 Plut-202ENSMUST00000174285 1444 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Col9a1Q05722 Lsmem1-202ENSMUST00000220951 2152 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Col9a1Q05722 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col9a1Q05722 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Col9a1Q05722 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col9a1Q05722 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col9a1Q05722 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Col9a1Q05722 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.75□□□□□ -0.53
Col9a1Q05722 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col9a1Q05722 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col9a1Q05722 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col9a1Q05722 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Col9a1Q05722 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col9a1Q05722 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col9a1Q05722 Gm26724-201ENSMUST00000180434 1650 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Col9a1Q05722 AC167013.2-201ENSMUST00000228520 2684 ntBASIC11.74□□□□□ -0.53
Col9a1Q05722 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Col9a1Q05722 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col9a1Q05722 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col9a1Q05722 Gm37912-201ENSMUST00000191895 3076 ntBASIC11.74□□□□□ -0.53
Col9a1Q05722 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col9a1Q05722 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col9a1Q05722 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Col9a1Q05722 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col9a1Q05722 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms