Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Gm23699-201ENSMUST00000158835 135 ntBASIC12.55□□□□□ -0.4
Trim43cP86449 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim43cP86449 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC12.55□□□□□ -0.4
Trim43cP86449 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC12.55□□□□□ -0.4
Trim43cP86449 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC12.55□□□□□ -0.4
Trim43cP86449 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC12.55□□□□□ -0.4
Trim43cP86449 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC12.55□□□□□ -0.4
Trim43cP86449 Gm44008-201ENSMUST00000204345 412 ntBASIC12.55□□□□□ -0.4
Trim43cP86449 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim43cP86449 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim43cP86449 Gm45909-201ENSMUST00000212413 1031 ntBASIC12.55□□□□□ -0.4
Trim43cP86449 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC12.55□□□□□ -0.4
Trim43cP86449 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim43cP86449 Ginm1-202ENSMUST00000065124 300 ntBASIC12.55□□□□□ -0.4
Trim43cP86449 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim43cP86449 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Trim43cP86449 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Trim43cP86449 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim43cP86449 Gm38055-201ENSMUST00000195353 2217 ntBASIC12.55□□□□□ -0.4
Trim43cP86449 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim43cP86449 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim43cP86449 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim43cP86449 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim43cP86449 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim43cP86449 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim43cP86449 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim43cP86449 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim43cP86449 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim43cP86449 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim43cP86449 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim43cP86449 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim43cP86449 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC12.54□□□□□ -0.4
Trim43cP86449 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim43cP86449 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim43cP86449 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim43cP86449 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim43cP86449 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim43cP86449 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim43cP86449 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim43cP86449 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trim43cP86449 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC12.54□□□□□ -0.4
Trim43cP86449 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trim43cP86449 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trim43cP86449 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim43cP86449 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trim43cP86449 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim43cP86449 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim43cP86449 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim43cP86449 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim43cP86449 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim43cP86449 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim43cP86449 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim43cP86449 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim43cP86449 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim43cP86449 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC12.54□□□□□ -0.4
Trim43cP86449 Gm12165-201ENSMUST00000117047 342 ntBASIC12.54□□□□□ -0.4
Trim43cP86449 Gm7666-201ENSMUST00000146631 819 ntBASIC12.54□□□□□ -0.4
Trim43cP86449 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim43cP86449 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC12.54□□□□□ -0.4
Trim43cP86449 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trim43cP86449 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC12.54□□□□□ -0.4
Trim43cP86449 Gm29499-201ENSMUST00000189151 486 ntBASIC12.54□□□□□ -0.4
Trim43cP86449 Gm28329-201ENSMUST00000191208 689 ntBASIC12.54□□□□□ -0.4
Trim43cP86449 Gm29171-201ENSMUST00000191397 486 ntBASIC12.54□□□□□ -0.4
Trim43cP86449 Gm44506-201ENSMUST00000206278 965 ntBASIC12.54□□□□□ -0.4
Trim43cP86449 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim43cP86449 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC12.54□□□□□ -0.4
Trim43cP86449 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim43cP86449 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim43cP86449 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Trim43cP86449 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim43cP86449 Gm45677-201ENSMUST00000209975 1341 ntBASIC12.54□□□□□ -0.4
Trim43cP86449 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim43cP86449 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim43cP86449 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim43cP86449 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim43cP86449 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim43cP86449 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim43cP86449 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim43cP86449 Gm35850-202ENSMUST00000211705 2120 ntBASIC12.53□□□□□ -0.4
Trim43cP86449 AC107453.4-201ENSMUST00000227068 1817 ntBASIC12.53□□□□□ -0.4
Trim43cP86449 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim43cP86449 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim43cP86449 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim43cP86449 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim43cP86449 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trim43cP86449 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim43cP86449 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim43cP86449 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim43cP86449 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trim43cP86449 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.53□□□□□ -0.4
Trim43cP86449 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Trim43cP86449 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Trim43cP86449 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC12.53□□□□□ -0.4
Trim43cP86449 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim43cP86449 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim43cP86449 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC12.53□□□□□ -0.4
Trim43cP86449 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim43cP86449 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim43cP86449 Gm10774-201ENSMUST00000188689 204 ntBASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms