Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Trim43bP86448 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim43bP86448 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC11.91□□□□□ -0.5
Trim43bP86448 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim43bP86448 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Trim43bP86448 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim43bP86448 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim43bP86448 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim43bP86448 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim43bP86448 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Trim43bP86448 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim43bP86448 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim43bP86448 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trim43bP86448 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC11.9□□□□□ -0.5
Trim43bP86448 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim43bP86448 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim43bP86448 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim43bP86448 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim43bP86448 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim43bP86448 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Trim43bP86448 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Trim43bP86448 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim43bP86448 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC11.9□□□□□ -0.5
Trim43bP86448 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
Trim43bP86448 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC11.9□□□□□ -0.5
Trim43bP86448 Gm12266-201ENSMUST00000120311 962 ntBASIC11.9□□□□□ -0.5
Trim43bP86448 Gm15610-201ENSMUST00000120584 195 ntBASIC11.9□□□□□ -0.5
Trim43bP86448 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim43bP86448 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.9□□□□□ -0.5
Trim43bP86448 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trim43bP86448 Gm29615-201ENSMUST00000185371 697 ntBASIC11.9□□□□□ -0.5
Trim43bP86448 Gm28224-201ENSMUST00000186078 697 ntBASIC11.9□□□□□ -0.5
Trim43bP86448 Gm29001-201ENSMUST00000186177 697 ntBASIC11.9□□□□□ -0.5
Trim43bP86448 Gm28292-201ENSMUST00000186593 697 ntBASIC11.9□□□□□ -0.5
Trim43bP86448 Gm28101-201ENSMUST00000187608 697 ntBASIC11.9□□□□□ -0.5
Trim43bP86448 Gm29076-201ENSMUST00000187689 697 ntBASIC11.9□□□□□ -0.5
Trim43bP86448 Gm28302-201ENSMUST00000187931 697 ntBASIC11.9□□□□□ -0.5
Trim43bP86448 Gm28646-201ENSMUST00000188220 697 ntBASIC11.9□□□□□ -0.5
Trim43bP86448 Gm28205-201ENSMUST00000189177 697 ntBASIC11.9□□□□□ -0.5
Trim43bP86448 Gm29032-201ENSMUST00000189797 697 ntBASIC11.9□□□□□ -0.5
Trim43bP86448 Gm28695-201ENSMUST00000190300 697 ntBASIC11.9□□□□□ -0.5
Trim43bP86448 Gm37448-201ENSMUST00000192795 697 ntBASIC11.9□□□□□ -0.5
Trim43bP86448 Gm17812-201ENSMUST00000204935 318 ntBASIC11.9□□□□□ -0.5
Trim43bP86448 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC11.9□□□□□ -0.5
Trim43bP86448 Gm8913-201ENSMUST00000209491 641 ntBASIC11.9□□□□□ -0.5
Trim43bP86448 AC107638.1-201ENSMUST00000213690 1061 ntBASIC11.9□□□□□ -0.5
Trim43bP86448 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trim43bP86448 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.9□□□□□ -0.5
Trim43bP86448 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.9□□□□□ -0.5
Trim43bP86448 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim43bP86448 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim43bP86448 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC11.9□□□□□ -0.5
Trim43bP86448 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC11.9□□□□□ -0.5
Trim43bP86448 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC11.9□□□□□ -0.5
Trim43bP86448 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim43bP86448 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim43bP86448 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim43bP86448 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Trim43bP86448 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trim43bP86448 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim43bP86448 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC11.9□□□□□ -0.5
Trim43bP86448 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC11.9□□□□□ -0.5
Trim43bP86448 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11.9□□□□□ -0.51
Trim43bP86448 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trim43bP86448 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC11.9□□□□□ -0.51
Trim43bP86448 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC11.9□□□□□ -0.51
Trim43bP86448 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trim43bP86448 Gm26684-202ENSMUST00000228229 8257 ntBASIC11.89□□□□□ -0.51
Trim43bP86448 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim43bP86448 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim43bP86448 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim43bP86448 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim43bP86448 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trim43bP86448 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim43bP86448 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Trim43bP86448 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim43bP86448 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Trim43bP86448 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC11.89□□□□□ -0.51
Trim43bP86448 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trim43bP86448 Rprl1-201ENSMUST00000158050 327 ntBASIC11.89□□□□□ -0.51
Trim43bP86448 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC11.89□□□□□ -0.51
Trim43bP86448 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Trim43bP86448 Gm27627-201ENSMUST00000183644 150 ntBASIC11.89□□□□□ -0.51
Trim43bP86448 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC11.89□□□□□ -0.51
Trim43bP86448 AY036118-201ENSMUST00000200021 923 ntBASIC11.89□□□□□ -0.51
Trim43bP86448 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC11.89□□□□□ -0.51
Trim43bP86448 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
Trim43bP86448 Gm19994-201ENSMUST00000217086 586 ntBASIC11.89□□□□□ -0.51
Trim43bP86448 Gm18730-201ENSMUST00000218038 343 ntBASIC11.89□□□□□ -0.51
Trim43bP86448 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trim43bP86448 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim43bP86448 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim43bP86448 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trim43bP86448 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim43bP86448 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trim43bP86448 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim43bP86448 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.89□□□□□ -0.51
Trim43bP86448 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim43bP86448 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trim43bP86448 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms