Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC12.51□□□□□ -0.41
CiitaP79621 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CiitaP79621 Gm3329-201ENSMUST00000159873 556 ntBASIC12.51□□□□□ -0.41
CiitaP79621 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CiitaP79621 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CiitaP79621 Gm21778-201ENSMUST00000178779 471 ntBASIC12.51□□□□□ -0.41
CiitaP79621 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC12.51□□□□□ -0.41
CiitaP79621 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC12.51□□□□□ -0.41
CiitaP79621 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC12.51□□□□□ -0.41
CiitaP79621 Gm37826-201ENSMUST00000195329 322 ntBASIC12.51□□□□□ -0.41
CiitaP79621 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC12.51□□□□□ -0.41
CiitaP79621 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CiitaP79621 Gm44008-201ENSMUST00000204345 412 ntBASIC12.51□□□□□ -0.41
CiitaP79621 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC12.51□□□□□ -0.41
CiitaP79621 CT010506.1-201ENSMUST00000223673 349 ntBASIC12.51□□□□□ -0.41
CiitaP79621 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CiitaP79621 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CiitaP79621 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CiitaP79621 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CiitaP79621 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CiitaP79621 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CiitaP79621 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CiitaP79621 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CiitaP79621 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CiitaP79621 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CiitaP79621 CT010447.1-201ENSMUST00000225657 1608 ntBASIC12.51□□□□□ -0.41
CiitaP79621 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC12.51□□□□□ -0.41
CiitaP79621 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CiitaP79621 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CiitaP79621 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CiitaP79621 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CiitaP79621 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CiitaP79621 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CiitaP79621 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CiitaP79621 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CiitaP79621 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
CiitaP79621 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CiitaP79621 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CiitaP79621 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC12.5□□□□□ -0.41
CiitaP79621 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC12.5□□□□□ -0.41
CiitaP79621 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CiitaP79621 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.5□□□□□ -0.41
CiitaP79621 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CiitaP79621 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC12.5□□□□□ -0.41
CiitaP79621 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
CiitaP79621 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
CiitaP79621 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC12.5□□□□□ -0.41
CiitaP79621 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CiitaP79621 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CiitaP79621 Mir1956-201ENSMUST00000157748 65 ntBASIC12.5□□□□□ -0.41
CiitaP79621 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CiitaP79621 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC12.5□□□□□ -0.41
CiitaP79621 Gm27438-201ENSMUST00000183480 110 ntBASIC12.5□□□□□ -0.41
CiitaP79621 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC12.5□□□□□ -0.41
CiitaP79621 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CiitaP79621 Gm43002-201ENSMUST00000200310 155 ntBASIC12.5□□□□□ -0.41
CiitaP79621 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC12.5□□□□□ -0.41
CiitaP79621 Gm6653-201ENSMUST00000218063 1288 ntBASIC12.5□□□□□ -0.41
CiitaP79621 CT030170.2-201ENSMUST00000223267 126 ntBASIC12.5□□□□□ -0.41
CiitaP79621 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
CiitaP79621 Gm6655-201ENSMUST00000201932 1309 ntBASIC12.5□□□□□ -0.41
CiitaP79621 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CiitaP79621 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC12.5□□□□□ -0.41
CiitaP79621 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CiitaP79621 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC12.5□□□□□ -0.41
CiitaP79621 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
CiitaP79621 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CiitaP79621 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CiitaP79621 Gm5740-201ENSMUST00000211003 1857 ntBASIC12.5□□□□□ -0.41
CiitaP79621 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CiitaP79621 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CiitaP79621 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
CiitaP79621 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CiitaP79621 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CiitaP79621 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.5□□□□□ -0.41
CiitaP79621 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC12.5□□□□□ -0.41
CiitaP79621 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
CiitaP79621 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.5□□□□□ -0.41
CiitaP79621 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CiitaP79621 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CiitaP79621 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CiitaP79621 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CiitaP79621 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CiitaP79621 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CiitaP79621 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CiitaP79621 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CiitaP79621 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
CiitaP79621 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CiitaP79621 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC12.49□□□□□ -0.41
CiitaP79621 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CiitaP79621 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
CiitaP79621 Gm26013-201ENSMUST00000104404 119 ntBASIC12.49□□□□□ -0.41
CiitaP79621 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC12.49□□□□□ -0.41
CiitaP79621 Gm14740-201ENSMUST00000118538 1150 ntBASIC12.49□□□□□ -0.41
CiitaP79621 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CiitaP79621 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC12.49□□□□□ -0.41
CiitaP79621 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CiitaP79621 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC12.49□□□□□ -0.41
CiitaP79621 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CiitaP79621 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms