Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Lmo4P61969 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Lmo4P61969 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Lmo4P61969 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Lmo4P61969 Gm5599-201ENSMUST00000209602 788 ntBASIC9.31□□□□□ -0.92
Lmo4P61969 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC9.31□□□□□ -0.92
Lmo4P61969 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC9.31□□□□□ -0.92
Lmo4P61969 Gm18514-201ENSMUST00000218980 436 ntBASIC9.31□□□□□ -0.92
Lmo4P61969 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Lmo4P61969 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Lmo4P61969 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC9.31□□□□□ -0.92
Lmo4P61969 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Lmo4P61969 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC9.31□□□□□ -0.92
Lmo4P61969 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Lmo4P61969 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Lmo4P61969 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Lmo4P61969 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC9.31□□□□□ -0.92
Lmo4P61969 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC9.31□□□□□ -0.92
Lmo4P61969 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Lmo4P61969 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Lmo4P61969 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Lmo4P61969 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Lmo4P61969 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Lmo4P61969 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC9.31□□□□□ -0.92
Lmo4P61969 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Lmo4P61969 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Lmo4P61969 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Lmo4P61969 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Lmo4P61969 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Lmo4P61969 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Lmo4P61969 Gm21759-201ENSMUST00000178345 1828 ntBASIC9.31□□□□□ -0.92
Lmo4P61969 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Lmo4P61969 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Lmo4P61969 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Lmo4P61969 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Lmo4P61969 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Lmo4P61969 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Lmo4P61969 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Lmo4P61969 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Lmo4P61969 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Lmo4P61969 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Lmo4P61969 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
Lmo4P61969 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC9.3□□□□□ -0.92
Lmo4P61969 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC9.3□□□□□ -0.92
Lmo4P61969 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
Lmo4P61969 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
Lmo4P61969 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC9.3□□□□□ -0.92
Lmo4P61969 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Lmo4P61969 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Lmo4P61969 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC9.3□□□□□ -0.92
Lmo4P61969 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Lmo4P61969 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC9.3□□□□□ -0.92
Lmo4P61969 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC9.3□□□□□ -0.92
Lmo4P61969 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC9.3□□□□□ -0.92
Lmo4P61969 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Lmo4P61969 Gm30946-201ENSMUST00000198288 724 ntBASIC9.3□□□□□ -0.92
Lmo4P61969 Gm44323-201ENSMUST00000198689 129 ntBASIC9.3□□□□□ -0.92
Lmo4P61969 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC9.3□□□□□ -0.92
Lmo4P61969 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Lmo4P61969 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC9.3□□□□□ -0.92
Lmo4P61969 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC9.3□□□□□ -0.92
Lmo4P61969 Gm18968-201ENSMUST00000221319 862 ntBASIC9.3□□□□□ -0.92
Lmo4P61969 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
Lmo4P61969 Lect2-202ENSMUST00000225183 823 ntBASIC9.3□□□□□ -0.92
Lmo4P61969 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Lmo4P61969 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Lmo4P61969 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
Lmo4P61969 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Lmo4P61969 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
Lmo4P61969 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
Lmo4P61969 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Lmo4P61969 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC9.3□□□□□ -0.92
Lmo4P61969 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Lmo4P61969 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Lmo4P61969 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Lmo4P61969 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Lmo4P61969 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Lmo4P61969 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Lmo4P61969 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
Lmo4P61969 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
Lmo4P61969 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Lmo4P61969 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Lmo4P61969 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC9.3□□□□□ -0.92
Lmo4P61969 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC9.3□□□□□ -0.92
Lmo4P61969 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
Lmo4P61969 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
Lmo4P61969 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Lmo4P61969 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Lmo4P61969 Gm43334-201ENSMUST00000197740 1318 ntBASIC9.3□□□□□ -0.92
Lmo4P61969 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC9.3□□□□□ -0.92
Lmo4P61969 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Lmo4P61969 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Lmo4P61969 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Lmo4P61969 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC9.29□□□□□ -0.92
Lmo4P61969 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Lmo4P61969 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Lmo4P61969 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Lmo4P61969 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC9.29□□□□□ -0.92
Lmo4P61969 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Lmo4P61969 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms