Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 AC122273.1-201ENSMUST00000213634 2327 ntBASIC11.03□□□□□ -0.64
Cdkn2bP55271 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdkn2bP55271 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cdkn2bP55271 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Cdkn2bP55271 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdkn2bP55271 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC11.03□□□□□ -0.64
Cdkn2bP55271 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cdkn2bP55271 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.03□□□□□ -0.64
Cdkn2bP55271 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdkn2bP55271 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cdkn2bP55271 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cdkn2bP55271 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cdkn2bP55271 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Cdkn2bP55271 Gm43622-201ENSMUST00000200140 2019 ntBASIC11.02□□□□□ -0.64
Cdkn2bP55271 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Cdkn2bP55271 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cdkn2bP55271 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Cdkn2bP55271 Gm37954-201ENSMUST00000195400 2071 ntBASIC11.02□□□□□ -0.64
Cdkn2bP55271 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Cdkn2bP55271 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cdkn2bP55271 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Cdkn2bP55271 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cdkn2bP55271 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC11.02□□□□□ -0.64
Cdkn2bP55271 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Cdkn2bP55271 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Cdkn2bP55271 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdkn2bP55271 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdkn2bP55271 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
Cdkn2bP55271 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdkn2bP55271 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdkn2bP55271 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC11.02□□□□□ -0.65
Cdkn2bP55271 Gm13392-201ENSMUST00000117708 150 ntBASIC11.02□□□□□ -0.65
Cdkn2bP55271 Gm13296-201ENSMUST00000117854 997 ntBASIC11.02□□□□□ -0.65
Cdkn2bP55271 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC11.02□□□□□ -0.65
Cdkn2bP55271 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cdkn2bP55271 Gm38228-201ENSMUST00000193169 1293 ntBASIC11.02□□□□□ -0.65
Cdkn2bP55271 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
Cdkn2bP55271 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC11.02□□□□□ -0.65
Cdkn2bP55271 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC11.02□□□□□ -0.65
Cdkn2bP55271 Gm7293-201ENSMUST00000216682 1007 ntBASIC11.02□□□□□ -0.65
Cdkn2bP55271 AC113082.1-201ENSMUST00000217324 327 ntBASIC11.02□□□□□ -0.65
Cdkn2bP55271 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdkn2bP55271 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdkn2bP55271 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Cdkn2bP55271 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdkn2bP55271 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Cdkn2bP55271 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdkn2bP55271 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdkn2bP55271 Gm9072-201ENSMUST00000218390 1514 ntBASIC11.02□□□□□ -0.65
Cdkn2bP55271 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Cdkn2bP55271 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Cdkn2bP55271 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdkn2bP55271 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdkn2bP55271 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdkn2bP55271 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdkn2bP55271 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdkn2bP55271 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdkn2bP55271 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC11.02□□□□□ -0.65
Cdkn2bP55271 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdkn2bP55271 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Cdkn2bP55271 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdkn2bP55271 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdkn2bP55271 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdkn2bP55271 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cdkn2bP55271 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cdkn2bP55271 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdkn2bP55271 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdkn2bP55271 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdkn2bP55271 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdkn2bP55271 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdkn2bP55271 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdkn2bP55271 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cdkn2bP55271 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdkn2bP55271 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
Cdkn2bP55271 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Cdkn2bP55271 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdkn2bP55271 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdkn2bP55271 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Cdkn2bP55271 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdkn2bP55271 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cdkn2bP55271 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdkn2bP55271 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdkn2bP55271 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdkn2bP55271 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC11.01□□□□□ -0.65
Cdkn2bP55271 Gm7150-201ENSMUST00000122032 981 ntBASIC11.01□□□□□ -0.65
Cdkn2bP55271 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC11.01□□□□□ -0.65
Cdkn2bP55271 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cdkn2bP55271 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC11.01□□□□□ -0.65
Cdkn2bP55271 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Cdkn2bP55271 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cdkn2bP55271 AA914427-201ENSMUST00000193194 1166 ntBASIC11.01□□□□□ -0.65
Cdkn2bP55271 Gm43184-201ENSMUST00000197247 542 ntBASIC11.01□□□□□ -0.65
Cdkn2bP55271 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC11.01□□□□□ -0.65
Cdkn2bP55271 Gm45113-201ENSMUST00000207518 165 ntBASIC11.01□□□□□ -0.65
Cdkn2bP55271 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC11.01□□□□□ -0.65
Cdkn2bP55271 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC11.01□□□□□ -0.65
Cdkn2bP55271 Cts7-204ENSMUST00000225321 1257 ntBASIC11.01□□□□□ -0.65
Cdkn2bP55271 AC123665.1-201ENSMUST00000228204 438 ntBASIC11.01□□□□□ -0.65
Cdkn2bP55271 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdkn2bP55271 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 10 ms