Protein–RNA interactions for Protein: P50404

Sftpd, Pulmonary surfactant-associated protein D, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpdP50404 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
SftpdP50404 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SftpdP50404 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SftpdP50404 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SftpdP50404 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
SftpdP50404 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SftpdP50404 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SftpdP50404 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
SftpdP50404 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
SftpdP50404 Gm6903-201ENSMUST00000160509 1366 ntBASIC12.14□□□□□ -0.47
SftpdP50404 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC12.14□□□□□ -0.47
SftpdP50404 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
SftpdP50404 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC12.14□□□□□ -0.47
SftpdP50404 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SftpdP50404 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SftpdP50404 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
SftpdP50404 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SftpdP50404 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
SftpdP50404 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
SftpdP50404 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC12.14□□□□□ -0.47
SftpdP50404 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SftpdP50404 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SftpdP50404 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SftpdP50404 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SftpdP50404 Gm44573-201ENSMUST00000191753 2370 ntBASIC12.13□□□□□ -0.47
SftpdP50404 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SftpdP50404 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SftpdP50404 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SftpdP50404 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SftpdP50404 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SftpdP50404 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SftpdP50404 Gm14193-201ENSMUST00000105067 153 ntBASIC12.13□□□□□ -0.47
SftpdP50404 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC12.13□□□□□ -0.47
SftpdP50404 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SftpdP50404 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC12.13□□□□□ -0.47
SftpdP50404 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SftpdP50404 Gm19353-201ENSMUST00000184561 445 ntBASIC12.13□□□□□ -0.47
SftpdP50404 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC12.13□□□□□ -0.47
SftpdP50404 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC12.13□□□□□ -0.47
SftpdP50404 Gm9555-201ENSMUST00000200908 583 ntBASIC12.13□□□□□ -0.47
SftpdP50404 Gm44506-201ENSMUST00000206278 965 ntBASIC12.13□□□□□ -0.47
SftpdP50404 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SftpdP50404 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SftpdP50404 AC118639.2-201ENSMUST00000226289 223 ntBASIC12.13□□□□□ -0.47
SftpdP50404 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SftpdP50404 AC164437.3-201ENSMUST00000228323 347 ntBASIC12.13□□□□□ -0.47
SftpdP50404 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SftpdP50404 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC12.13□□□□□ -0.47
SftpdP50404 Gm37931-201ENSMUST00000194686 2866 ntBASIC12.13□□□□□ -0.47
SftpdP50404 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SftpdP50404 Gm7964-201ENSMUST00000051522 1378 ntBASIC12.13□□□□□ -0.47
SftpdP50404 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SftpdP50404 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC12.13□□□□□ -0.47
SftpdP50404 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SftpdP50404 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
SftpdP50404 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SftpdP50404 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SftpdP50404 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
SftpdP50404 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SftpdP50404 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SftpdP50404 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
SftpdP50404 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SftpdP50404 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SftpdP50404 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
SftpdP50404 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SftpdP50404 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SftpdP50404 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
SftpdP50404 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SftpdP50404 AC122811.1-201ENSMUST00000222257 2921 ntBASIC12.12□□□□□ -0.47
SftpdP50404 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
SftpdP50404 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SftpdP50404 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SftpdP50404 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SftpdP50404 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SftpdP50404 Gm22920-201ENSMUST00000102175 109 ntBASIC12.12□□□□□ -0.47
SftpdP50404 Gm12247-201ENSMUST00000117585 670 ntBASIC12.12□□□□□ -0.47
SftpdP50404 Gm9062-201ENSMUST00000117712 727 ntBASIC12.12□□□□□ -0.47
SftpdP50404 Gm13045-201ENSMUST00000119019 712 ntBASIC12.12□□□□□ -0.47
SftpdP50404 Gm12566-201ENSMUST00000121479 359 ntBASIC12.12□□□□□ -0.47
SftpdP50404 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC12.12□□□□□ -0.47
SftpdP50404 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
SftpdP50404 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SftpdP50404 Gm29164-201ENSMUST00000185454 1024 ntBASIC12.12□□□□□ -0.47
SftpdP50404 Gm7395-201ENSMUST00000216059 1045 ntBASIC12.12□□□□□ -0.47
SftpdP50404 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC12.12□□□□□ -0.47
SftpdP50404 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SftpdP50404 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
SftpdP50404 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SftpdP50404 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SftpdP50404 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SftpdP50404 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SftpdP50404 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SftpdP50404 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SftpdP50404 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SftpdP50404 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SftpdP50404 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SftpdP50404 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC12.12□□□□□ -0.47
SftpdP50404 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SftpdP50404 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SftpdP50404 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms