Protein–RNA interactions for Protein: P48678

Lmna, Prelamin-A/C, mousemouse

Known RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LmnaP48678 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
LmnaP48678 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LmnaP48678 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LmnaP48678 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC12.18□□□□□ -0.46
LmnaP48678 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LmnaP48678 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LmnaP48678 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.18□□□□□ -0.46
LmnaP48678 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LmnaP48678 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LmnaP48678 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LmnaP48678 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
LmnaP48678 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
LmnaP48678 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
LmnaP48678 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LmnaP48678 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LmnaP48678 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
LmnaP48678 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LmnaP48678 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
LmnaP48678 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LmnaP48678 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LmnaP48678 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LmnaP48678 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LmnaP48678 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LmnaP48678 Gm23596-201ENSMUST00000104304 132 ntBASIC12.17□□□□□ -0.46
LmnaP48678 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC12.17□□□□□ -0.46
LmnaP48678 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
LmnaP48678 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
LmnaP48678 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
LmnaP48678 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LmnaP48678 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LmnaP48678 Gm25201-201ENSMUST00000083093 170 ntBASIC12.17□□□□□ -0.46
LmnaP48678 Gm7551-201ENSMUST00000089593 1074 ntBASIC12.17□□□□□ -0.46
LmnaP48678 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC12.17□□□□□ -0.46
LmnaP48678 Gm43980-201ENSMUST00000204899 1612 ntBASIC12.17□□□□□ -0.46
LmnaP48678 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LmnaP48678 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LmnaP48678 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.17□□□□□ -0.46
LmnaP48678 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
LmnaP48678 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
LmnaP48678 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LmnaP48678 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.17□□□□□ -0.46
LmnaP48678 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.17□□□□□ -0.46
LmnaP48678 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
LmnaP48678 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
LmnaP48678 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
LmnaP48678 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LmnaP48678 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LmnaP48678 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LmnaP48678 Olfr282-203ENSMUST00000213608 1374 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
LmnaP48678 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LmnaP48678 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LmnaP48678 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LmnaP48678 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LmnaP48678 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
LmnaP48678 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LmnaP48678 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LmnaP48678 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LmnaP48678 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LmnaP48678 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
LmnaP48678 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
LmnaP48678 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LmnaP48678 Gm13384-201ENSMUST00000117166 1344 ntBASIC12.16□□□□□ -0.46
LmnaP48678 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
LmnaP48678 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
LmnaP48678 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
LmnaP48678 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
LmnaP48678 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
LmnaP48678 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
LmnaP48678 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LmnaP48678 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LmnaP48678 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC12.16□□□□□ -0.46
LmnaP48678 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LmnaP48678 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
LmnaP48678 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LmnaP48678 Gm14133-201ENSMUST00000139471 1274 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LmnaP48678 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC12.16□□□□□ -0.46
LmnaP48678 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.16□□□□□ -0.46
LmnaP48678 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LmnaP48678 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC12.16□□□□□ -0.46
LmnaP48678 Gm5726-201ENSMUST00000173886 924 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
LmnaP48678 Gm8677-201ENSMUST00000174637 924 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
LmnaP48678 Gm23771-201ENSMUST00000178702 110 ntBASIC12.16□□□□□ -0.46
LmnaP48678 Mir6923-201ENSMUST00000184592 72 ntBASIC12.16□□□□□ -0.46
LmnaP48678 Gm27910-201ENSMUST00000185004 107 ntBASIC12.16□□□□□ -0.46
LmnaP48678 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LmnaP48678 Gm5852-201ENSMUST00000194119 1021 ntBASIC12.16□□□□□ -0.46
LmnaP48678 Gm5542-201ENSMUST00000195485 1089 ntBASIC12.16□□□□□ -0.46
LmnaP48678 Gm42599-201ENSMUST00000201308 469 ntBASIC12.16□□□□□ -0.46
LmnaP48678 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LmnaP48678 Gm45120-201ENSMUST00000208880 408 ntBASIC12.16□□□□□ -0.46
LmnaP48678 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LmnaP48678 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC12.16□□□□□ -0.46
LmnaP48678 AC140375.1-201ENSMUST00000225421 694 ntBASIC12.16□□□□□ -0.46
LmnaP48678 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LmnaP48678 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LmnaP48678 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LmnaP48678 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LmnaP48678 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LmnaP48678 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
LmnaP48678 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms