Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
BdnfP21237 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
BdnfP21237 AC126444.1-201ENSMUST00000225938 1768 ntBASIC11.11□□□□□ -0.63
BdnfP21237 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
BdnfP21237 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
BdnfP21237 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
BdnfP21237 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
BdnfP21237 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
BdnfP21237 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC11.11□□□□□ -0.63
BdnfP21237 Gtf2h3-201ENSMUST00000031333 2672 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
BdnfP21237 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
BdnfP21237 Apobec3-204ENSMUST00000175714 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
BdnfP21237 Gm38227-201ENSMUST00000193036 1602 ntBASIC11.11□□□□□ -0.63
BdnfP21237 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC11.11□□□□□ -0.63
BdnfP21237 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
BdnfP21237 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
BdnfP21237 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
BdnfP21237 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC11.11□□□□□ -0.63
BdnfP21237 Gm7895-201ENSMUST00000187459 1173 ntBASIC11.11□□□□□ -0.63
BdnfP21237 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC11.11□□□□□ -0.63
BdnfP21237 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC11.11□□□□□ -0.63
BdnfP21237 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
BdnfP21237 AC153954.1-201ENSMUST00000216959 255 ntBASIC11.11□□□□□ -0.63
BdnfP21237 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC11.11□□□□□ -0.63
BdnfP21237 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC11.11□□□□□ -0.63
BdnfP21237 AC122371.3-201ENSMUST00000223402 1061 ntBASIC11.11□□□□□ -0.63
BdnfP21237 CT010486.3-201ENSMUST00000224555 811 ntBASIC11.11□□□□□ -0.63
BdnfP21237 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
BdnfP21237 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
BdnfP21237 Gm8399-201ENSMUST00000082300 1117 ntBASIC11.11□□□□□ -0.63
BdnfP21237 Gm43937-201ENSMUST00000204640 3122 ntBASIC11.11□□□□□ -0.63
BdnfP21237 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
BdnfP21237 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
BdnfP21237 Olfr764-ps1-201ENSMUST00000204763 2854 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
BdnfP21237 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
BdnfP21237 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
BdnfP21237 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
BdnfP21237 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
BdnfP21237 Cfb-201ENSMUST00000025229 2737 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
BdnfP21237 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
BdnfP21237 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
BdnfP21237 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
BdnfP21237 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC11.11□□□□□ -0.63
BdnfP21237 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
BdnfP21237 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
BdnfP21237 Satb1-207ENSMUST00000140979 3748 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
BdnfP21237 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
BdnfP21237 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
BdnfP21237 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
BdnfP21237 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
BdnfP21237 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
BdnfP21237 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
BdnfP21237 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
BdnfP21237 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC11.1□□□□□ -0.63
BdnfP21237 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC11.1□□□□□ -0.63
BdnfP21237 Zfp943-201ENSMUST00000055349 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
BdnfP21237 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
BdnfP21237 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
BdnfP21237 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC11.1□□□□□ -0.63
BdnfP21237 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
BdnfP21237 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
BdnfP21237 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
BdnfP21237 Gm14109-201ENSMUST00000118814 309 ntBASIC11.1□□□□□ -0.63
BdnfP21237 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
BdnfP21237 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
BdnfP21237 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
BdnfP21237 Gm27046-201ENSMUST00000182160 463 ntBASIC11.1□□□□□ -0.63
BdnfP21237 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC11.1□□□□□ -0.63
BdnfP21237 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
BdnfP21237 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC11.1□□□□□ -0.63
BdnfP21237 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC11.1□□□□□ -0.63
BdnfP21237 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC11.1□□□□□ -0.63
BdnfP21237 Gm4607-201ENSMUST00000206649 577 ntBASIC11.1□□□□□ -0.63
BdnfP21237 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
BdnfP21237 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
BdnfP21237 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
BdnfP21237 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
BdnfP21237 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
BdnfP21237 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
BdnfP21237 Smad2-201ENSMUST00000025453 2410 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
BdnfP21237 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
BdnfP21237 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
BdnfP21237 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
BdnfP21237 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
BdnfP21237 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
BdnfP21237 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
BdnfP21237 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
BdnfP21237 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.1□□□□□ -0.63
BdnfP21237 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
BdnfP21237 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
BdnfP21237 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
BdnfP21237 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
BdnfP21237 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC11.09□□□□□ -0.63
BdnfP21237 Gm11661-201ENSMUST00000121761 1327 ntBASIC11.09□□□□□ -0.63
BdnfP21237 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC11.09□□□□□ -0.63
BdnfP21237 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
BdnfP21237 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
BdnfP21237 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
BdnfP21237 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
BdnfP21237 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms