Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Gm29001-201ENSMUST00000186177 697 ntBASIC12.48□□□□□ -0.41
RaraP11416 Gm28292-201ENSMUST00000186593 697 ntBASIC12.48□□□□□ -0.41
RaraP11416 Gm28101-201ENSMUST00000187608 697 ntBASIC12.48□□□□□ -0.41
RaraP11416 Gm29076-201ENSMUST00000187689 697 ntBASIC12.48□□□□□ -0.41
RaraP11416 Gm28302-201ENSMUST00000187931 697 ntBASIC12.48□□□□□ -0.41
RaraP11416 Gm28646-201ENSMUST00000188220 697 ntBASIC12.48□□□□□ -0.41
RaraP11416 Gm28205-201ENSMUST00000189177 697 ntBASIC12.48□□□□□ -0.41
RaraP11416 Gm29032-201ENSMUST00000189797 697 ntBASIC12.48□□□□□ -0.41
RaraP11416 Gm28695-201ENSMUST00000190300 697 ntBASIC12.48□□□□□ -0.41
RaraP11416 Gm37448-201ENSMUST00000192795 697 ntBASIC12.48□□□□□ -0.41
RaraP11416 Gm43184-201ENSMUST00000197247 542 ntBASIC12.48□□□□□ -0.41
RaraP11416 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC12.48□□□□□ -0.41
RaraP11416 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC12.48□□□□□ -0.41
RaraP11416 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RaraP11416 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
RaraP11416 Gm26448-201ENSMUST00000082446 203 ntBASIC12.48□□□□□ -0.41
RaraP11416 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
RaraP11416 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RaraP11416 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RaraP11416 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RaraP11416 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
RaraP11416 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RaraP11416 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RaraP11416 AC167565.1-201ENSMUST00000226980 1833 ntBASIC12.48□□□□□ -0.41
RaraP11416 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC12.48□□□□□ -0.41
RaraP11416 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RaraP11416 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
RaraP11416 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RaraP11416 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RaraP11416 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RaraP11416 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RaraP11416 Gm45206-201ENSMUST00000206885 2285 ntBASIC12.48□□□□□ -0.41
RaraP11416 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
RaraP11416 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RaraP11416 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC12.47□□□□□ -0.41
RaraP11416 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
RaraP11416 Gm38089-201ENSMUST00000193585 1514 ntBASIC12.47□□□□□ -0.41
RaraP11416 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
RaraP11416 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
RaraP11416 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RaraP11416 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
RaraP11416 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RaraP11416 Gm18262-201ENSMUST00000222560 1946 ntBASIC12.47□□□□□ -0.41
RaraP11416 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RaraP11416 Crry-ps-201ENSMUST00000079090 1309 ntBASIC12.47□□□□□ -0.41
RaraP11416 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RaraP11416 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC12.47□□□□□ -0.41
RaraP11416 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
RaraP11416 Gm15198-201ENSMUST00000117283 177 ntBASIC12.47□□□□□ -0.41
RaraP11416 Gm12715-201ENSMUST00000121430 1128 ntBASIC12.47□□□□□ -0.41
RaraP11416 Gm17376-201ENSMUST00000166016 84 ntBASIC12.47□□□□□ -0.41
RaraP11416 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC12.47□□□□□ -0.41
RaraP11416 Gm25890-201ENSMUST00000177643 165 ntBASIC12.47□□□□□ -0.41
RaraP11416 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
RaraP11416 Rnu1b2-201ENSMUST00000178073 165 ntBASIC12.47□□□□□ -0.41
RaraP11416 Rnu1b1-201ENSMUST00000178250 165 ntBASIC12.47□□□□□ -0.41
RaraP11416 Gm22614-201ENSMUST00000178300 165 ntBASIC12.47□□□□□ -0.41
RaraP11416 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RaraP11416 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC12.47□□□□□ -0.41
RaraP11416 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.47□□□□□ -0.41
RaraP11416 Gm7003-201ENSMUST00000195089 312 ntBASIC12.47□□□□□ -0.41
RaraP11416 Gm7783-201ENSMUST00000204795 781 ntBASIC12.47□□□□□ -0.41
RaraP11416 Gm44262-201ENSMUST00000204969 372 ntBASIC12.47□□□□□ -0.41
RaraP11416 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RaraP11416 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RaraP11416 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
RaraP11416 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RaraP11416 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RaraP11416 Gm22042-201ENSMUST00000082989 165 ntBASIC12.47□□□□□ -0.41
RaraP11416 Gm26110-201ENSMUST00000083971 165 ntBASIC12.47□□□□□ -0.41
RaraP11416 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RaraP11416 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC12.47□□□□□ -0.41
RaraP11416 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
RaraP11416 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
RaraP11416 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RaraP11416 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
RaraP11416 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
RaraP11416 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RaraP11416 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RaraP11416 CT010447.1-201ENSMUST00000225657 1608 ntBASIC12.47□□□□□ -0.41
RaraP11416 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
RaraP11416 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC12.47□□□□□ -0.41
RaraP11416 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RaraP11416 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RaraP11416 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
RaraP11416 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RaraP11416 Gm45199-201ENSMUST00000207640 1507 ntBASIC12.47□□□□□ -0.41
RaraP11416 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RaraP11416 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
RaraP11416 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RaraP11416 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC12.46□□□□□ -0.41
RaraP11416 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RaraP11416 Btrc-209ENSMUST00000224478 2194 ntBASIC12.46□□□□□ -0.41
RaraP11416 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
RaraP11416 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RaraP11416 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RaraP11416 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RaraP11416 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC12.46□□□□□ -0.41
RaraP11416 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RaraP11416 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 88.4 ms