Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC9.26□□□□□ -0.93
Hoxd3P09027 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Hoxd3P09027 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Hoxd3P09027 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Hoxd3P09027 Gm13722-201ENSMUST00000117964 3066 ntBASIC9.26□□□□□ -0.93
Hoxd3P09027 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Hoxd3P09027 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Hoxd3P09027 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Hoxd3P09027 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Hoxd3P09027 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Hoxd3P09027 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
Hoxd3P09027 Gm37131-201ENSMUST00000192502 1561 ntBASIC9.26□□□□□ -0.93
Hoxd3P09027 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Hoxd3P09027 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Hoxd3P09027 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Hoxd3P09027 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Hoxd3P09027 Gm24891-201ENSMUST00000104391 136 ntBASIC9.26□□□□□ -0.93
Hoxd3P09027 Gm13678-201ENSMUST00000118926 340 ntBASIC9.26□□□□□ -0.93
Hoxd3P09027 Gm8261-201ENSMUST00000119275 1208 ntBASIC9.26□□□□□ -0.93
Hoxd3P09027 Gm12201-201ENSMUST00000120657 1234 ntBASIC9.26□□□□□ -0.93
Hoxd3P09027 Gm11660-201ENSMUST00000120955 412 ntBASIC9.26□□□□□ -0.93
Hoxd3P09027 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC9.26□□□□□ -0.93
Hoxd3P09027 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC9.26□□□□□ -0.93
Hoxd3P09027 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC9.26□□□□□ -0.93
Hoxd3P09027 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC9.26□□□□□ -0.93
Hoxd3P09027 Gm18799-201ENSMUST00000189104 913 ntBASIC9.26□□□□□ -0.93
Hoxd3P09027 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC9.26□□□□□ -0.93
Hoxd3P09027 Gm34767-201ENSMUST00000191813 1062 ntBASIC9.26□□□□□ -0.93
Hoxd3P09027 Gm26801-202ENSMUST00000193187 610 ntTSL 3 BASIC9.26□□□□□ -0.93
Hoxd3P09027 Gm42997-202ENSMUST00000200321 985 ntBASIC9.26□□□□□ -0.93
Hoxd3P09027 Gm4482-201ENSMUST00000200876 742 ntBASIC9.26□□□□□ -0.93
Hoxd3P09027 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Hoxd3P09027 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Hoxd3P09027 Gm44124-201ENSMUST00000204159 472 ntBASIC9.26□□□□□ -0.93
Hoxd3P09027 Tas2r141-ps4-201ENSMUST00000205072 946 ntBASIC9.26□□□□□ -0.93
Hoxd3P09027 Olfr1449-202ENSMUST00000208624 1296 ntAPPRIS P1 TSL 3 BASIC9.26□□□□□ -0.93
Hoxd3P09027 Gm5369-201ENSMUST00000217499 588 ntBASIC9.26□□□□□ -0.93
Hoxd3P09027 Mrpl42-202ENSMUST00000217777 455 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Hoxd3P09027 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC9.26□□□□□ -0.93
Hoxd3P09027 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Hoxd3P09027 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Hoxd3P09027 Gpr87-201ENSMUST00000056898 1080 ntBASIC9.26□□□□□ -0.93
Hoxd3P09027 Olfr812-201ENSMUST00000057775 1043 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
Hoxd3P09027 Gm5705-201ENSMUST00000066241 711 ntBASIC9.26□□□□□ -0.93
Hoxd3P09027 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Hoxd3P09027 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Hoxd3P09027 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Hoxd3P09027 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Hoxd3P09027 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Hoxd3P09027 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Hoxd3P09027 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Hoxd3P09027 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Hoxd3P09027 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Hoxd3P09027 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Hoxd3P09027 Gm8177-201ENSMUST00000181591 1336 ntBASIC9.26□□□□□ -0.93
Hoxd3P09027 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Hoxd3P09027 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Hoxd3P09027 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
Hoxd3P09027 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Hoxd3P09027 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Hoxd3P09027 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC9.26□□□□□ -0.93
Hoxd3P09027 Gm9072-201ENSMUST00000218390 1514 ntBASIC9.26□□□□□ -0.93
Hoxd3P09027 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
Hoxd3P09027 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Hoxd3P09027 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Hoxd3P09027 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Hoxd3P09027 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Hoxd3P09027 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Hoxd3P09027 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Hoxd3P09027 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Hoxd3P09027 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Hoxd3P09027 Gm6211-201ENSMUST00000147973 4275 ntBASIC9.25□□□□□ -0.93
Hoxd3P09027 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Hoxd3P09027 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Hoxd3P09027 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Hoxd3P09027 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
Hoxd3P09027 Mir669l-201ENSMUST00000103771 98 ntBASIC9.25□□□□□ -0.93
Hoxd3P09027 Prl8a8-202ENSMUST00000110350 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Hoxd3P09027 Gm11509-201ENSMUST00000117358 325 ntBASIC9.25□□□□□ -0.93
Hoxd3P09027 Gm12857-201ENSMUST00000117678 592 ntBASIC9.25□□□□□ -0.93
Hoxd3P09027 Gm11941-201ENSMUST00000119904 610 ntBASIC9.25□□□□□ -0.93
Hoxd3P09027 Gm12696-201ENSMUST00000122361 905 ntBASIC9.25□□□□□ -0.93
Hoxd3P09027 Gm11266-201ENSMUST00000139835 1271 ntTSL 2 BASIC9.25□□□□□ -0.93
Hoxd3P09027 Gm23085-201ENSMUST00000157849 293 ntBASIC9.25□□□□□ -0.93
Hoxd3P09027 Gm22902-201ENSMUST00000158488 302 ntBASIC9.25□□□□□ -0.93
Hoxd3P09027 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC9.25□□□□□ -0.93
Hoxd3P09027 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Hoxd3P09027 Vmn1r139-201ENSMUST00000169730 894 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
Hoxd3P09027 4930445B16Rik-201ENSMUST00000170085 1123 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Hoxd3P09027 Gm20426-201ENSMUST00000173657 440 ntBASIC9.25□□□□□ -0.93
Hoxd3P09027 Vmn1r112-201ENSMUST00000174538 894 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
Hoxd3P09027 Vmn1r157-201ENSMUST00000178215 894 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
Hoxd3P09027 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC9.25□□□□□ -0.93
Hoxd3P09027 Gm28686-201ENSMUST00000187404 609 ntBASIC9.25□□□□□ -0.93
Hoxd3P09027 Gm19214-201ENSMUST00000191956 1083 ntBASIC9.25□□□□□ -0.93
Hoxd3P09027 Gm38117-201ENSMUST00000194653 939 ntBASIC9.25□□□□□ -0.93
Hoxd3P09027 Gm18893-201ENSMUST00000198416 943 ntBASIC9.25□□□□□ -0.93
Hoxd3P09027 D530037P16Rik-201ENSMUST00000199255 1027 ntBASIC9.25□□□□□ -0.93
Hoxd3P09027 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Hoxd3P09027 Gm44823-201ENSMUST00000204775 1107 ntBASIC9.25□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms