Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CopeO89079 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CopeO89079 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CopeO89079 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
CopeO89079 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CopeO89079 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CopeO89079 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
CopeO89079 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
CopeO89079 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
CopeO89079 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC11.86□□□□□ -0.51
CopeO89079 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CopeO89079 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CopeO89079 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
CopeO89079 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
CopeO89079 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
CopeO89079 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CopeO89079 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC11.86□□□□□ -0.51
CopeO89079 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC11.86□□□□□ -0.51
CopeO89079 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
CopeO89079 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CopeO89079 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CopeO89079 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CopeO89079 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CopeO89079 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
CopeO89079 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CopeO89079 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CopeO89079 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
CopeO89079 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
CopeO89079 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
CopeO89079 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC11.86□□□□□ -0.51
CopeO89079 Gm12463-201ENSMUST00000118271 849 ntBASIC11.86□□□□□ -0.51
CopeO89079 Gm14109-201ENSMUST00000118814 309 ntBASIC11.86□□□□□ -0.51
CopeO89079 Trav4d-2-201ENSMUST00000120914 335 ntBASIC11.86□□□□□ -0.51
CopeO89079 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CopeO89079 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
CopeO89079 Gm37424-201ENSMUST00000191727 561 ntBASIC11.86□□□□□ -0.51
CopeO89079 Gm5982-201ENSMUST00000196234 512 ntBASIC11.86□□□□□ -0.51
CopeO89079 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC11.86□□□□□ -0.51
CopeO89079 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CopeO89079 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC11.86□□□□□ -0.51
CopeO89079 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
CopeO89079 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC11.86□□□□□ -0.51
CopeO89079 Olfr1347-205ENSMUST00000220413 964 ntBASIC11.86□□□□□ -0.51
CopeO89079 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
CopeO89079 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CopeO89079 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
CopeO89079 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC11.86□□□□□ -0.51
CopeO89079 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.86□□□□□ -0.51
CopeO89079 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.86□□□□□ -0.51
CopeO89079 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CopeO89079 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
CopeO89079 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC11.86□□□□□ -0.51
CopeO89079 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CopeO89079 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CopeO89079 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
CopeO89079 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CopeO89079 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CopeO89079 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CopeO89079 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CopeO89079 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CopeO89079 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CopeO89079 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CopeO89079 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC11.86□□□□□ -0.51
CopeO89079 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CopeO89079 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
CopeO89079 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
CopeO89079 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CopeO89079 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CopeO89079 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
CopeO89079 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
CopeO89079 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC11.85□□□□□ -0.51
CopeO89079 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
CopeO89079 Gm37122-201ENSMUST00000195313 1567 ntBASIC11.85□□□□□ -0.51
CopeO89079 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CopeO89079 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CopeO89079 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
CopeO89079 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
CopeO89079 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
CopeO89079 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC11.85□□□□□ -0.51
CopeO89079 Gm14726-201ENSMUST00000120623 896 ntBASIC11.85□□□□□ -0.51
CopeO89079 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CopeO89079 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CopeO89079 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC11.85□□□□□ -0.51
CopeO89079 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC11.85□□□□□ -0.51
CopeO89079 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
CopeO89079 Gm29164-201ENSMUST00000185454 1024 ntBASIC11.85□□□□□ -0.51
CopeO89079 Gm32999-201ENSMUST00000192693 562 ntBASIC11.85□□□□□ -0.51
CopeO89079 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC11.85□□□□□ -0.51
CopeO89079 Gm18935-201ENSMUST00000212692 664 ntBASIC11.85□□□□□ -0.51
CopeO89079 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC11.85□□□□□ -0.51
CopeO89079 AC159896.2-201ENSMUST00000214753 269 ntBASIC11.85□□□□□ -0.51
CopeO89079 AC134869.4-202ENSMUST00000224350 837 ntBASIC11.85□□□□□ -0.51
CopeO89079 CT025533.2-201ENSMUST00000228715 1248 ntBASIC11.85□□□□□ -0.51
CopeO89079 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CopeO89079 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CopeO89079 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CopeO89079 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CopeO89079 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CopeO89079 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
CopeO89079 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms