Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC11.45□□□□□ -0.58
Pdlim1O70400 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pdlim1O70400 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pdlim1O70400 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.45□□□□□ -0.58
Pdlim1O70400 AC154537.1-201ENSMUST00000226101 1304 ntBASIC11.45□□□□□ -0.58
Pdlim1O70400 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pdlim1O70400 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pdlim1O70400 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pdlim1O70400 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pdlim1O70400 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.45□□□□□ -0.58
Pdlim1O70400 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pdlim1O70400 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC11.45□□□□□ -0.58
Pdlim1O70400 Gm11331-201ENSMUST00000119764 288 ntBASIC11.45□□□□□ -0.58
Pdlim1O70400 Gm8737-201ENSMUST00000122208 642 ntBASIC11.45□□□□□ -0.58
Pdlim1O70400 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
Pdlim1O70400 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC11.45□□□□□ -0.58
Pdlim1O70400 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pdlim1O70400 Gm23699-201ENSMUST00000158835 135 ntBASIC11.45□□□□□ -0.58
Pdlim1O70400 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Pdlim1O70400 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pdlim1O70400 Gm20495-201ENSMUST00000173902 235 ntBASIC11.45□□□□□ -0.58
Pdlim1O70400 Mir5132-201ENSMUST00000175166 71 ntBASIC11.45□□□□□ -0.58
Pdlim1O70400 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC11.45□□□□□ -0.58
Pdlim1O70400 Gm29164-201ENSMUST00000185454 1024 ntBASIC11.45□□□□□ -0.58
Pdlim1O70400 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pdlim1O70400 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pdlim1O70400 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pdlim1O70400 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Pdlim1O70400 Gm8420-201ENSMUST00000097103 598 ntBASIC11.45□□□□□ -0.58
Pdlim1O70400 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pdlim1O70400 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pdlim1O70400 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pdlim1O70400 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pdlim1O70400 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pdlim1O70400 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pdlim1O70400 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC11.45□□□□□ -0.58
Pdlim1O70400 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Pdlim1O70400 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pdlim1O70400 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
Pdlim1O70400 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Pdlim1O70400 CT010447.1-201ENSMUST00000225657 1608 ntBASIC11.45□□□□□ -0.58
Pdlim1O70400 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC11.45□□□□□ -0.58
Pdlim1O70400 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.45□□□□□ -0.58
Pdlim1O70400 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC11.45□□□□□ -0.58
Pdlim1O70400 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC11.45□□□□□ -0.58
Pdlim1O70400 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pdlim1O70400 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pdlim1O70400 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC11.45□□□□□ -0.58
Pdlim1O70400 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pdlim1O70400 Gm37849-201ENSMUST00000194722 1881 ntBASIC11.44□□□□□ -0.58
Pdlim1O70400 CT009489.1-201ENSMUST00000227740 1893 ntBASIC11.44□□□□□ -0.58
Pdlim1O70400 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pdlim1O70400 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pdlim1O70400 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pdlim1O70400 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pdlim1O70400 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pdlim1O70400 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Pdlim1O70400 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pdlim1O70400 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Pdlim1O70400 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Pdlim1O70400 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Pdlim1O70400 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pdlim1O70400 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pdlim1O70400 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pdlim1O70400 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pdlim1O70400 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Pdlim1O70400 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Pdlim1O70400 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Pdlim1O70400 Gm12247-201ENSMUST00000117585 670 ntBASIC11.44□□□□□ -0.58
Pdlim1O70400 Gm14314-201ENSMUST00000118225 1015 ntBASIC11.44□□□□□ -0.58
Pdlim1O70400 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC11.44□□□□□ -0.58
Pdlim1O70400 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC11.44□□□□□ -0.58
Pdlim1O70400 Gm22144-201ENSMUST00000157402 102 ntBASIC11.44□□□□□ -0.58
Pdlim1O70400 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Pdlim1O70400 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pdlim1O70400 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC11.44□□□□□ -0.58
Pdlim1O70400 Mir6979-201ENSMUST00000183927 56 ntBASIC11.44□□□□□ -0.58
Pdlim1O70400 Gm9555-201ENSMUST00000200908 583 ntBASIC11.44□□□□□ -0.58
Pdlim1O70400 Gm44008-201ENSMUST00000204345 412 ntBASIC11.44□□□□□ -0.58
Pdlim1O70400 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Pdlim1O70400 Gm8342-201ENSMUST00000209839 757 ntBASIC11.44□□□□□ -0.58
Pdlim1O70400 Gm2517-201ENSMUST00000215651 348 ntBASIC11.44□□□□□ -0.58
Pdlim1O70400 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC11.44□□□□□ -0.58
Pdlim1O70400 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pdlim1O70400 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pdlim1O70400 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pdlim1O70400 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Pdlim1O70400 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pdlim1O70400 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Pdlim1O70400 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.44□□□□□ -0.58
Pdlim1O70400 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Pdlim1O70400 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Pdlim1O70400 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
Pdlim1O70400 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pdlim1O70400 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Pdlim1O70400 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Pdlim1O70400 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pdlim1O70400 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pdlim1O70400 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Pdlim1O70400 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 86.3 ms