Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Smarce1O54941 Gm15207-201ENSMUST00000119259 442 ntBASIC13.69□□□□□ -0.22
Smarce1O54941 Gm14381-201ENSMUST00000122105 414 ntBASIC13.69□□□□□ -0.22
Smarce1O54941 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC13.69□□□□□ -0.22
Smarce1O54941 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC13.69□□□□□ -0.22
Smarce1O54941 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC13.69□□□□□ -0.22
Smarce1O54941 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC13.69□□□□□ -0.22
Smarce1O54941 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC13.69□□□□□ -0.22
Smarce1O54941 AY036118-201ENSMUST00000200021 923 ntBASIC13.69□□□□□ -0.22
Smarce1O54941 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Smarce1O54941 AC159896.2-201ENSMUST00000214753 269 ntBASIC13.69□□□□□ -0.22
Smarce1O54941 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC13.69□□□□□ -0.22
Smarce1O54941 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarce1O54941 Gm8399-201ENSMUST00000082300 1117 ntBASIC13.69□□□□□ -0.22
Smarce1O54941 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC13.69□□□□□ -0.22
Smarce1O54941 Gm29245-201ENSMUST00000187332 1416 ntBASIC13.69□□□□□ -0.22
Smarce1O54941 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarce1O54941 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
Smarce1O54941 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarce1O54941 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Smarce1O54941 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarce1O54941 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarce1O54941 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarce1O54941 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarce1O54941 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smarce1O54941 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smarce1O54941 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smarce1O54941 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smarce1O54941 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smarce1O54941 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Smarce1O54941 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smarce1O54941 Gm5859-201ENSMUST00000165401 2324 ntBASIC13.68□□□□□ -0.22
Smarce1O54941 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smarce1O54941 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smarce1O54941 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smarce1O54941 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smarce1O54941 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC13.68□□□□□ -0.22
Smarce1O54941 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Smarce1O54941 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smarce1O54941 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC13.68□□□□□ -0.22
Smarce1O54941 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
Smarce1O54941 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Smarce1O54941 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC13.68□□□□□ -0.22
Smarce1O54941 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC13.68□□□□□ -0.22
Smarce1O54941 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC13.68□□□□□ -0.22
Smarce1O54941 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Smarce1O54941 Gm7895-201ENSMUST00000187459 1173 ntBASIC13.68□□□□□ -0.22
Smarce1O54941 Gm38317-201ENSMUST00000195564 343 ntBASIC13.68□□□□□ -0.22
Smarce1O54941 Gm17812-201ENSMUST00000204935 318 ntBASIC13.68□□□□□ -0.22
Smarce1O54941 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC13.68□□□□□ -0.22
Smarce1O54941 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC13.68□□□□□ -0.22
Smarce1O54941 AC113082.1-201ENSMUST00000217324 327 ntBASIC13.68□□□□□ -0.22
Smarce1O54941 AC160929.1-201ENSMUST00000221247 415 ntBASIC13.68□□□□□ -0.22
Smarce1O54941 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smarce1O54941 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smarce1O54941 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smarce1O54941 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smarce1O54941 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Smarce1O54941 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smarce1O54941 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC13.68□□□□□ -0.22
Smarce1O54941 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Smarce1O54941 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Smarce1O54941 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smarce1O54941 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smarce1O54941 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smarce1O54941 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smarce1O54941 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smarce1O54941 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smarce1O54941 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smarce1O54941 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Smarce1O54941 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Smarce1O54941 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Smarce1O54941 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smarce1O54941 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smarce1O54941 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smarce1O54941 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smarce1O54941 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Smarce1O54941 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Smarce1O54941 Gm20482-202ENSMUST00000174729 825 ntBASIC13.67□□□□□ -0.22
Smarce1O54941 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC13.67□□□□□ -0.22
Smarce1O54941 Gm29615-201ENSMUST00000185371 697 ntBASIC13.67□□□□□ -0.22
Smarce1O54941 Gm28224-201ENSMUST00000186078 697 ntBASIC13.67□□□□□ -0.22
Smarce1O54941 Gm29001-201ENSMUST00000186177 697 ntBASIC13.67□□□□□ -0.22
Smarce1O54941 Gm28292-201ENSMUST00000186593 697 ntBASIC13.67□□□□□ -0.22
Smarce1O54941 Gm28101-201ENSMUST00000187608 697 ntBASIC13.67□□□□□ -0.22
Smarce1O54941 Gm29076-201ENSMUST00000187689 697 ntBASIC13.67□□□□□ -0.22
Smarce1O54941 Gm28302-201ENSMUST00000187931 697 ntBASIC13.67□□□□□ -0.22
Smarce1O54941 Gm28646-201ENSMUST00000188220 697 ntBASIC13.67□□□□□ -0.22
Smarce1O54941 Gm28205-201ENSMUST00000189177 697 ntBASIC13.67□□□□□ -0.22
Smarce1O54941 Gm29032-201ENSMUST00000189797 697 ntBASIC13.67□□□□□ -0.22
Smarce1O54941 Gm28695-201ENSMUST00000190300 697 ntBASIC13.67□□□□□ -0.22
Smarce1O54941 Gm37448-201ENSMUST00000192795 697 ntBASIC13.67□□□□□ -0.22
Smarce1O54941 Gm38228-201ENSMUST00000193169 1293 ntBASIC13.67□□□□□ -0.22
Smarce1O54941 Gm44008-201ENSMUST00000204345 412 ntBASIC13.67□□□□□ -0.22
Smarce1O54941 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC13.67□□□□□ -0.22
Smarce1O54941 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Smarce1O54941 Gm26448-201ENSMUST00000082446 203 ntBASIC13.67□□□□□ -0.22
Smarce1O54941 Gm9072-201ENSMUST00000218390 1514 ntBASIC13.67□□□□□ -0.22
Smarce1O54941 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smarce1O54941 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms