Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 Gm37859-201ENSMUST00000195529 2173 ntBASIC11.76□□□□□ -0.53
Ccdc149F6V035 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc149F6V035 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc149F6V035 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc149F6V035 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC11.76□□□□□ -0.53
Ccdc149F6V035 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Ccdc149F6V035 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc149F6V035 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Ccdc149F6V035 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.76□□□□□ -0.53
Ccdc149F6V035 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Ccdc149F6V035 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc149F6V035 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Ccdc149F6V035 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC11.76□□□□□ -0.53
Ccdc149F6V035 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.76□□□□□ -0.53
Ccdc149F6V035 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc149F6V035 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc149F6V035 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc149F6V035 Gm27177-202ENSMUST00000183514 2703 ntBASIC11.75□□□□□ -0.53
Ccdc149F6V035 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc149F6V035 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.75□□□□□ -0.53
Ccdc149F6V035 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc149F6V035 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc149F6V035 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc149F6V035 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc149F6V035 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Ccdc149F6V035 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Ccdc149F6V035 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Ccdc149F6V035 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc149F6V035 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Ccdc149F6V035 Gm14892-201ENSMUST00000117636 267 ntBASIC11.75□□□□□ -0.53
Ccdc149F6V035 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc149F6V035 Gm16219-201ENSMUST00000120096 274 ntBASIC11.75□□□□□ -0.53
Ccdc149F6V035 Gm13937-201ENSMUST00000121000 988 ntBASIC11.75□□□□□ -0.53
Ccdc149F6V035 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC11.75□□□□□ -0.53
Ccdc149F6V035 Gm15549-201ENSMUST00000121595 622 ntBASIC11.75□□□□□ -0.53
Ccdc149F6V035 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC11.75□□□□□ -0.53
Ccdc149F6V035 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC11.75□□□□□ -0.53
Ccdc149F6V035 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc149F6V035 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC11.75□□□□□ -0.53
Ccdc149F6V035 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC11.75□□□□□ -0.53
Ccdc149F6V035 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC11.75□□□□□ -0.53
Ccdc149F6V035 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC11.75□□□□□ -0.53
Ccdc149F6V035 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc149F6V035 Mir6958-201ENSMUST00000184207 73 ntBASIC11.75□□□□□ -0.53
Ccdc149F6V035 Gm37028-201ENSMUST00000194276 107 ntBASIC11.75□□□□□ -0.53
Ccdc149F6V035 Gm38314-201ENSMUST00000195709 625 ntBASIC11.75□□□□□ -0.53
Ccdc149F6V035 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc149F6V035 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC11.75□□□□□ -0.53
Ccdc149F6V035 AC102368.1-201ENSMUST00000227161 892 ntBASIC11.75□□□□□ -0.53
Ccdc149F6V035 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc149F6V035 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc149F6V035 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Ccdc149F6V035 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc149F6V035 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc149F6V035 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc149F6V035 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc149F6V035 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc149F6V035 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc149F6V035 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc149F6V035 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc149F6V035 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc149F6V035 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Ccdc149F6V035 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc149F6V035 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc149F6V035 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Ccdc149F6V035 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc149F6V035 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc149F6V035 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.75□□□□□ -0.53
Ccdc149F6V035 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC11.75□□□□□ -0.53
Ccdc149F6V035 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc149F6V035 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc149F6V035 Gm7841-201ENSMUST00000122108 1629 ntBASIC11.75□□□□□ -0.53
Ccdc149F6V035 Gm4900-201ENSMUST00000222046 1628 ntBASIC11.75□□□□□ -0.53
Ccdc149F6V035 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc149F6V035 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc149F6V035 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Ccdc149F6V035 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC11.74□□□□□ -0.53
Ccdc149F6V035 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Ccdc149F6V035 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc149F6V035 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc149F6V035 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc149F6V035 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc149F6V035 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.74□□□□□ -0.53
Ccdc149F6V035 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc149F6V035 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc149F6V035 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc149F6V035 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc149F6V035 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Ccdc149F6V035 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc149F6V035 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Ccdc149F6V035 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc149F6V035 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc149F6V035 Gm4294-201ENSMUST00000105169 614 ntBASIC11.74□□□□□ -0.53
Ccdc149F6V035 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC11.74□□□□□ -0.53
Ccdc149F6V035 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC11.74□□□□□ -0.53
Ccdc149F6V035 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc149F6V035 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Ccdc149F6V035 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC11.74□□□□□ -0.53
Ccdc149F6V035 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC11.74□□□□□ -0.53
Ccdc149F6V035 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 108.6 ms