Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Gm24332-201ENSMUST00000175102 102 ntBASIC13.51□□□□□ -0.25
Scn11aQ9R053 Gm25959-201ENSMUST00000175112 102 ntBASIC13.51□□□□□ -0.25
Scn11aQ9R053 Gm22475-201ENSMUST00000175169 102 ntBASIC13.51□□□□□ -0.25
Scn11aQ9R053 Gm22903-201ENSMUST00000175193 102 ntBASIC13.51□□□□□ -0.25
Scn11aQ9R053 Gm25070-201ENSMUST00000175237 102 ntBASIC13.51□□□□□ -0.25
Scn11aQ9R053 Gm24159-201ENSMUST00000175264 102 ntBASIC13.51□□□□□ -0.25
Scn11aQ9R053 Gm25299-201ENSMUST00000175283 102 ntBASIC13.51□□□□□ -0.25
Scn11aQ9R053 Gm23798-201ENSMUST00000175560 102 ntBASIC13.51□□□□□ -0.25
Scn11aQ9R053 Gm23802-201ENSMUST00000175565 102 ntBASIC13.51□□□□□ -0.25
Scn11aQ9R053 Gm25708-201ENSMUST00000177687 102 ntBASIC13.51□□□□□ -0.25
Scn11aQ9R053 Gm24370-201ENSMUST00000178007 102 ntBASIC13.51□□□□□ -0.25
Scn11aQ9R053 Gm23049-201ENSMUST00000178068 102 ntBASIC13.51□□□□□ -0.25
Scn11aQ9R053 Gm28019-201ENSMUST00000178138 101 ntBASIC13.51□□□□□ -0.25
Scn11aQ9R053 Gm25571-201ENSMUST00000178322 102 ntBASIC13.51□□□□□ -0.25
Scn11aQ9R053 Gm25355-201ENSMUST00000178456 101 ntBASIC13.51□□□□□ -0.25
Scn11aQ9R053 Gm24975-201ENSMUST00000178492 101 ntBASIC13.51□□□□□ -0.25
Scn11aQ9R053 Gm23189-201ENSMUST00000178954 102 ntBASIC13.51□□□□□ -0.25
Scn11aQ9R053 Gm25100-201ENSMUST00000179750 101 ntBASIC13.51□□□□□ -0.25
Scn11aQ9R053 Gm23064-201ENSMUST00000179866 101 ntBASIC13.51□□□□□ -0.25
Scn11aQ9R053 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC13.51□□□□□ -0.25
Scn11aQ9R053 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC13.51□□□□□ -0.25
Scn11aQ9R053 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC13.51□□□□□ -0.25
Scn11aQ9R053 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Scn11aQ9R053 Cma1-202ENSMUST00000226280 1090 ntAPPRIS ALT2 BASIC13.51□□□□□ -0.25
Scn11aQ9R053 Cma1-201ENSMUST00000022834 1074 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scn11aQ9R053 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scn11aQ9R053 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scn11aQ9R053 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Scn11aQ9R053 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scn11aQ9R053 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Scn11aQ9R053 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scn11aQ9R053 Gm44241-201ENSMUST00000203230 1662 ntBASIC13.51□□□□□ -0.25
Scn11aQ9R053 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scn11aQ9R053 Gm37931-201ENSMUST00000194686 2866 ntBASIC13.51□□□□□ -0.25
Scn11aQ9R053 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Scn11aQ9R053 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Scn11aQ9R053 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scn11aQ9R053 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scn11aQ9R053 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Scn11aQ9R053 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Scn11aQ9R053 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scn11aQ9R053 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Scn11aQ9R053 Gm45776-201ENSMUST00000212366 1522 ntBASIC13.51□□□□□ -0.25
Scn11aQ9R053 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Scn11aQ9R053 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Scn11aQ9R053 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scn11aQ9R053 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scn11aQ9R053 Gm5335-201ENSMUST00000182995 1000 ntBASIC13.5□□□□□ -0.25
Scn11aQ9R053 Gm7627-201ENSMUST00000183205 999 ntBASIC13.5□□□□□ -0.25
Scn11aQ9R053 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC13.5□□□□□ -0.25
Scn11aQ9R053 Gm6606-201ENSMUST00000193613 947 ntBASIC13.5□□□□□ -0.25
Scn11aQ9R053 Gm30731-201ENSMUST00000203909 825 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Scn11aQ9R053 Abracl-203ENSMUST00000218994 425 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Scn11aQ9R053 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC13.5□□□□□ -0.25
Scn11aQ9R053 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC13.5□□□□□ -0.25
Scn11aQ9R053 Prr19-201ENSMUST00000080288 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scn11aQ9R053 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scn11aQ9R053 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Scn11aQ9R053 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scn11aQ9R053 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scn11aQ9R053 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Scn11aQ9R053 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scn11aQ9R053 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scn11aQ9R053 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scn11aQ9R053 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC13.5□□□□□ -0.25
Scn11aQ9R053 Gm18210-201ENSMUST00000209001 1524 ntBASIC13.5□□□□□ -0.25
Scn11aQ9R053 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scn11aQ9R053 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scn11aQ9R053 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Scn11aQ9R053 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scn11aQ9R053 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Scn11aQ9R053 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scn11aQ9R053 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scn11aQ9R053 Gm23612-201ENSMUST00000103823 110 ntBASIC13.5□□□□□ -0.25
Scn11aQ9R053 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Scn11aQ9R053 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Scn11aQ9R053 Gm23576-201ENSMUST00000179918 110 ntBASIC13.5□□□□□ -0.25
Scn11aQ9R053 Gm9625-201ENSMUST00000180422 955 ntBASIC13.5□□□□□ -0.25
Scn11aQ9R053 AC162932.1-201ENSMUST00000219209 872 ntBASIC13.5□□□□□ -0.25
Scn11aQ9R053 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC13.5□□□□□ -0.25
Scn11aQ9R053 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scn11aQ9R053 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scn11aQ9R053 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Scn11aQ9R053 4930555A03Rik-201ENSMUST00000196052 1556 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Scn11aQ9R053 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scn11aQ9R053 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Scn11aQ9R053 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Scn11aQ9R053 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Scn11aQ9R053 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Scn11aQ9R053 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scn11aQ9R053 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Scn11aQ9R053 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Scn11aQ9R053 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Scn11aQ9R053 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scn11aQ9R053 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Scn11aQ9R053 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Scn11aQ9R053 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Scn11aQ9R053 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scn11aQ9R053 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scn11aQ9R053 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms