Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ube3bQ9ES34 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ube3bQ9ES34 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Ube3bQ9ES34 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ube3bQ9ES34 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ube3bQ9ES34 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ube3bQ9ES34 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ube3bQ9ES34 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC13.78□□□□□ -0.2
Ube3bQ9ES34 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ube3bQ9ES34 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ube3bQ9ES34 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ube3bQ9ES34 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ube3bQ9ES34 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ube3bQ9ES34 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Ube3bQ9ES34 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ube3bQ9ES34 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC13.78□□□□□ -0.2
Ube3bQ9ES34 Gm5342-201ENSMUST00000181982 1003 ntBASIC13.78□□□□□ -0.2
Ube3bQ9ES34 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC13.78□□□□□ -0.2
Ube3bQ9ES34 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ube3bQ9ES34 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Ube3bQ9ES34 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC13.78□□□□□ -0.2
Ube3bQ9ES34 Gm37826-201ENSMUST00000195329 322 ntBASIC13.78□□□□□ -0.2
Ube3bQ9ES34 Gm2875-201ENSMUST00000211333 360 ntBASIC13.78□□□□□ -0.2
Ube3bQ9ES34 Gm35638-201ENSMUST00000220724 652 ntBASIC13.78□□□□□ -0.2
Ube3bQ9ES34 Gm9661-201ENSMUST00000221611 1122 ntBASIC13.78□□□□□ -0.2
Ube3bQ9ES34 Rpp30-201ENSMUST00000025714 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ube3bQ9ES34 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Ube3bQ9ES34 Rnf212-201ENSMUST00000068946 288 ntTSL 5 BASIC13.78□□□□□ -0.2
Ube3bQ9ES34 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ube3bQ9ES34 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ube3bQ9ES34 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC13.78□□□□□ -0.2
Ube3bQ9ES34 Hormad1-201ENSMUST00000029754 1385 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ube3bQ9ES34 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ube3bQ9ES34 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ube3bQ9ES34 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ube3bQ9ES34 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ube3bQ9ES34 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ube3bQ9ES34 Gm4900-201ENSMUST00000222046 1628 ntBASIC13.78□□□□□ -0.2
Ube3bQ9ES34 Gm9279-201ENSMUST00000223175 1606 ntBASIC13.78□□□□□ -0.2
Ube3bQ9ES34 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ube3bQ9ES34 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ube3bQ9ES34 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ube3bQ9ES34 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ube3bQ9ES34 AC165351.1-201ENSMUST00000219078 2020 ntBASIC13.78□□□□□ -0.2
Ube3bQ9ES34 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ube3bQ9ES34 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ube3bQ9ES34 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ube3bQ9ES34 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
Ube3bQ9ES34 Gm45743-201ENSMUST00000212701 2795 ntBASIC13.77□□□□□ -0.2
Ube3bQ9ES34 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ube3bQ9ES34 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ube3bQ9ES34 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ube3bQ9ES34 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ube3bQ9ES34 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC13.77□□□□□ -0.21
Ube3bQ9ES34 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ube3bQ9ES34 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ube3bQ9ES34 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Ube3bQ9ES34 Gm25318-201ENSMUST00000122554 314 ntBASIC13.77□□□□□ -0.21
Ube3bQ9ES34 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ube3bQ9ES34 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC13.77□□□□□ -0.21
Ube3bQ9ES34 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ube3bQ9ES34 Gm15904-201ENSMUST00000154515 487 ntTSL 3 BASIC13.77□□□□□ -0.21
Ube3bQ9ES34 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Ube3bQ9ES34 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC13.77□□□□□ -0.21
Ube3bQ9ES34 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ube3bQ9ES34 Fam240b-201ENSMUST00000180282 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ube3bQ9ES34 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC13.77□□□□□ -0.21
Ube3bQ9ES34 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC13.77□□□□□ -0.21
Ube3bQ9ES34 Gm44545-201ENSMUST00000208262 746 ntBASIC13.77□□□□□ -0.21
Ube3bQ9ES34 Gm45166-201ENSMUST00000209073 683 ntBASIC13.77□□□□□ -0.21
Ube3bQ9ES34 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC13.77□□□□□ -0.21
Ube3bQ9ES34 Gm45856-201ENSMUST00000212752 416 ntBASIC13.77□□□□□ -0.21
Ube3bQ9ES34 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC13.77□□□□□ -0.21
Ube3bQ9ES34 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC13.77□□□□□ -0.21
Ube3bQ9ES34 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC13.77□□□□□ -0.21
Ube3bQ9ES34 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ube3bQ9ES34 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ube3bQ9ES34 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ube3bQ9ES34 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ube3bQ9ES34 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Ube3bQ9ES34 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ube3bQ9ES34 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Ube3bQ9ES34 Arhgef3-204ENSMUST00000225949 3198 ntBASIC13.77□□□□□ -0.21
Ube3bQ9ES34 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ube3bQ9ES34 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC13.77□□□□□ -0.21
Ube3bQ9ES34 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ube3bQ9ES34 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Ube3bQ9ES34 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC13.76□□□□□ -0.21
Ube3bQ9ES34 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ube3bQ9ES34 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ube3bQ9ES34 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Ube3bQ9ES34 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ube3bQ9ES34 CT573086.2-201ENSMUST00000227277 4992 ntBASIC13.76□□□□□ -0.21
Ube3bQ9ES34 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Ube3bQ9ES34 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ube3bQ9ES34 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ube3bQ9ES34 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ube3bQ9ES34 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Ube3bQ9ES34 Gm28424-201ENSMUST00000187393 1319 ntBASIC13.76□□□□□ -0.21
Ube3bQ9ES34 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms