Protein–RNA interactions for Protein: Q9D439

Cfap53, Cilia- and flagella-associated protein 53, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap53Q9D439 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cfap53Q9D439 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Cfap53Q9D439 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cfap53Q9D439 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Cfap53Q9D439 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cfap53Q9D439 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cfap53Q9D439 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cfap53Q9D439 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cfap53Q9D439 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cfap53Q9D439 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cfap53Q9D439 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cfap53Q9D439 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC12.71□□□□□ -0.37
Cfap53Q9D439 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Cfap53Q9D439 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cfap53Q9D439 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cfap53Q9D439 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cfap53Q9D439 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Cfap53Q9D439 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cfap53Q9D439 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cfap53Q9D439 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
Cfap53Q9D439 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cfap53Q9D439 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cfap53Q9D439 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC12.71□□□□□ -0.37
Cfap53Q9D439 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC12.71□□□□□ -0.37
Cfap53Q9D439 Gm18065-201ENSMUST00000221395 526 ntBASIC12.71□□□□□ -0.37
Cfap53Q9D439 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cfap53Q9D439 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cfap53Q9D439 Gm10288-201ENSMUST00000084614 537 ntBASIC12.71□□□□□ -0.37
Cfap53Q9D439 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cfap53Q9D439 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cfap53Q9D439 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cfap53Q9D439 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Cfap53Q9D439 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cfap53Q9D439 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC12.71□□□□□ -0.38
Cfap53Q9D439 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Cfap53Q9D439 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cfap53Q9D439 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC12.7□□□□□ -0.38
Cfap53Q9D439 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cfap53Q9D439 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC12.7□□□□□ -0.38
Cfap53Q9D439 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cfap53Q9D439 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Cfap53Q9D439 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cfap53Q9D439 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cfap53Q9D439 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cfap53Q9D439 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Cfap53Q9D439 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cfap53Q9D439 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Cfap53Q9D439 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
Cfap53Q9D439 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cfap53Q9D439 Gm17040-202ENSMUST00000170597 889 ntBASIC12.7□□□□□ -0.38
Cfap53Q9D439 Gm8100-201ENSMUST00000182906 988 ntBASIC12.7□□□□□ -0.38
Cfap53Q9D439 Mir8093-201ENSMUST00000185043 137 ntBASIC12.7□□□□□ -0.38
Cfap53Q9D439 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC12.7□□□□□ -0.38
Cfap53Q9D439 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cfap53Q9D439 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC12.7□□□□□ -0.38
Cfap53Q9D439 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cfap53Q9D439 Gm21811-201ENSMUST00000096485 930 ntBASIC12.7□□□□□ -0.38
Cfap53Q9D439 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cfap53Q9D439 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cfap53Q9D439 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cfap53Q9D439 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC12.7□□□□□ -0.38
Cfap53Q9D439 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cfap53Q9D439 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cfap53Q9D439 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Cfap53Q9D439 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cfap53Q9D439 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cfap53Q9D439 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cfap53Q9D439 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cfap53Q9D439 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cfap53Q9D439 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cfap53Q9D439 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cfap53Q9D439 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC12.69□□□□□ -0.38
Cfap53Q9D439 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
Cfap53Q9D439 Gm45776-201ENSMUST00000212366 1522 ntBASIC12.69□□□□□ -0.38
Cfap53Q9D439 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Cfap53Q9D439 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cfap53Q9D439 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cfap53Q9D439 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cfap53Q9D439 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cfap53Q9D439 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Cfap53Q9D439 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cfap53Q9D439 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC12.69□□□□□ -0.38
Cfap53Q9D439 Gm16481-201ENSMUST00000119074 1227 ntBASIC12.69□□□□□ -0.38
Cfap53Q9D439 Gm11783-201ENSMUST00000119549 885 ntBASIC12.69□□□□□ -0.38
Cfap53Q9D439 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC12.69□□□□□ -0.38
Cfap53Q9D439 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC12.69□□□□□ -0.38
Cfap53Q9D439 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC12.69□□□□□ -0.38
Cfap53Q9D439 H2-Q3-201ENSMUST00000172583 608 ntBASIC12.69□□□□□ -0.38
Cfap53Q9D439 Gm28450-201ENSMUST00000187349 638 ntBASIC12.69□□□□□ -0.38
Cfap53Q9D439 Gm5982-201ENSMUST00000196234 512 ntBASIC12.69□□□□□ -0.38
Cfap53Q9D439 Gm5714-201ENSMUST00000197343 566 ntBASIC12.69□□□□□ -0.38
Cfap53Q9D439 Gm45575-201ENSMUST00000210283 548 ntBASIC12.69□□□□□ -0.38
Cfap53Q9D439 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Cfap53Q9D439 AC151275.1-201ENSMUST00000224870 585 ntBASIC12.69□□□□□ -0.38
Cfap53Q9D439 CT025694.1-201ENSMUST00000226188 934 ntBASIC12.69□□□□□ -0.38
Cfap53Q9D439 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cfap53Q9D439 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Cfap53Q9D439 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cfap53Q9D439 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cfap53Q9D439 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms