Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
Snf8Q9CZ28 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Snf8Q9CZ28 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Snf8Q9CZ28 Gm12241-201ENSMUST00000118330 726 ntBASIC11.89□□□□□ -0.51
Snf8Q9CZ28 Gm11222-201ENSMUST00000119005 738 ntBASIC11.89□□□□□ -0.51
Snf8Q9CZ28 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Snf8Q9CZ28 Gm3329-201ENSMUST00000159873 556 ntBASIC11.89□□□□□ -0.51
Snf8Q9CZ28 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Snf8Q9CZ28 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Snf8Q9CZ28 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC11.89□□□□□ -0.51
Snf8Q9CZ28 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Snf8Q9CZ28 Gm6450-201ENSMUST00000200896 574 ntBASIC11.89□□□□□ -0.51
Snf8Q9CZ28 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC11.89□□□□□ -0.51
Snf8Q9CZ28 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC11.89□□□□□ -0.51
Snf8Q9CZ28 Rps4l-202ENSMUST00000204242 789 ntBASIC11.89□□□□□ -0.51
Snf8Q9CZ28 Gm45691-201ENSMUST00000206905 1120 ntBASIC11.89□□□□□ -0.51
Snf8Q9CZ28 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Snf8Q9CZ28 AC159896.2-201ENSMUST00000214753 269 ntBASIC11.89□□□□□ -0.51
Snf8Q9CZ28 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC11.89□□□□□ -0.51
Snf8Q9CZ28 AC125350.2-201ENSMUST00000224737 727 ntBASIC11.89□□□□□ -0.51
Snf8Q9CZ28 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Snf8Q9CZ28 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Snf8Q9CZ28 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Snf8Q9CZ28 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Snf8Q9CZ28 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Snf8Q9CZ28 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Snf8Q9CZ28 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Snf8Q9CZ28 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC11.89□□□□□ -0.51
Snf8Q9CZ28 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Snf8Q9CZ28 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Snf8Q9CZ28 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Snf8Q9CZ28 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Snf8Q9CZ28 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Snf8Q9CZ28 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Snf8Q9CZ28 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Snf8Q9CZ28 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Snf8Q9CZ28 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Snf8Q9CZ28 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Snf8Q9CZ28 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Snf8Q9CZ28 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Snf8Q9CZ28 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Snf8Q9CZ28 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Snf8Q9CZ28 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Snf8Q9CZ28 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Snf8Q9CZ28 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Snf8Q9CZ28 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Snf8Q9CZ28 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Snf8Q9CZ28 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Snf8Q9CZ28 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Snf8Q9CZ28 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC11.88□□□□□ -0.51
Snf8Q9CZ28 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Snf8Q9CZ28 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Snf8Q9CZ28 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Snf8Q9CZ28 AC153380.1-201ENSMUST00000214959 2364 ntBASIC11.88□□□□□ -0.51
Snf8Q9CZ28 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Snf8Q9CZ28 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
Snf8Q9CZ28 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC11.88□□□□□ -0.51
Snf8Q9CZ28 Gm11930-201ENSMUST00000117788 190 ntBASIC11.88□□□□□ -0.51
Snf8Q9CZ28 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Snf8Q9CZ28 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Snf8Q9CZ28 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Snf8Q9CZ28 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC11.88□□□□□ -0.51
Snf8Q9CZ28 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Snf8Q9CZ28 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Snf8Q9CZ28 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC11.88□□□□□ -0.51
Snf8Q9CZ28 Gm27516-201ENSMUST00000184237 98 ntBASIC11.88□□□□□ -0.51
Snf8Q9CZ28 Mir8093-201ENSMUST00000185043 137 ntBASIC11.88□□□□□ -0.51
Snf8Q9CZ28 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC11.88□□□□□ -0.51
Snf8Q9CZ28 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Snf8Q9CZ28 Gm31256-201ENSMUST00000194705 506 ntBASIC11.88□□□□□ -0.51
Snf8Q9CZ28 Gm9368-201ENSMUST00000219348 831 ntBASIC11.88□□□□□ -0.51
Snf8Q9CZ28 Olfr1347-205ENSMUST00000220413 964 ntBASIC11.88□□□□□ -0.51
Snf8Q9CZ28 AC134869.4-202ENSMUST00000224350 837 ntBASIC11.88□□□□□ -0.51
Snf8Q9CZ28 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Snf8Q9CZ28 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Snf8Q9CZ28 Gm9899-201ENSMUST00000065519 555 ntBASIC11.88□□□□□ -0.51
Snf8Q9CZ28 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Snf8Q9CZ28 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Snf8Q9CZ28 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Snf8Q9CZ28 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Snf8Q9CZ28 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Snf8Q9CZ28 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Snf8Q9CZ28 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Snf8Q9CZ28 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Snf8Q9CZ28 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Snf8Q9CZ28 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Snf8Q9CZ28 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Snf8Q9CZ28 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Snf8Q9CZ28 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Snf8Q9CZ28 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Snf8Q9CZ28 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Snf8Q9CZ28 Gm37122-201ENSMUST00000195313 1567 ntBASIC11.88□□□□□ -0.51
Snf8Q9CZ28 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Snf8Q9CZ28 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Snf8Q9CZ28 Gm43622-201ENSMUST00000200140 2019 ntBASIC11.87□□□□□ -0.51
Snf8Q9CZ28 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Snf8Q9CZ28 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Snf8Q9CZ28 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Snf8Q9CZ28 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Snf8Q9CZ28 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms