Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Rpa3Q9CQ71 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rpa3Q9CQ71 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rpa3Q9CQ71 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rpa3Q9CQ71 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rpa3Q9CQ71 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rpa3Q9CQ71 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rpa3Q9CQ71 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC12.23□□□□□ -0.45
Rpa3Q9CQ71 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rpa3Q9CQ71 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Rpa3Q9CQ71 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC12.23□□□□□ -0.45
Rpa3Q9CQ71 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rpa3Q9CQ71 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rpa3Q9CQ71 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rpa3Q9CQ71 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rpa3Q9CQ71 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rpa3Q9CQ71 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Rpa3Q9CQ71 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC12.23□□□□□ -0.45
Rpa3Q9CQ71 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC12.23□□□□□ -0.45
Rpa3Q9CQ71 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC12.23□□□□□ -0.45
Rpa3Q9CQ71 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rpa3Q9CQ71 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC12.23□□□□□ -0.45
Rpa3Q9CQ71 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC12.23□□□□□ -0.45
Rpa3Q9CQ71 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rpa3Q9CQ71 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Rpa3Q9CQ71 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC12.23□□□□□ -0.45
Rpa3Q9CQ71 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC12.23□□□□□ -0.45
Rpa3Q9CQ71 Gm44136-201ENSMUST00000203819 1106 ntBASIC12.23□□□□□ -0.45
Rpa3Q9CQ71 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC12.23□□□□□ -0.45
Rpa3Q9CQ71 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rpa3Q9CQ71 CT009713.8-202ENSMUST00000224732 385 ntBASIC12.23□□□□□ -0.45
Rpa3Q9CQ71 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Rpa3Q9CQ71 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rpa3Q9CQ71 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC12.23□□□□□ -0.45
Rpa3Q9CQ71 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rpa3Q9CQ71 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rpa3Q9CQ71 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rpa3Q9CQ71 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rpa3Q9CQ71 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Rpa3Q9CQ71 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rpa3Q9CQ71 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC12.22□□□□□ -0.45
Rpa3Q9CQ71 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Rpa3Q9CQ71 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Rpa3Q9CQ71 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC12.22□□□□□ -0.45
Rpa3Q9CQ71 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rpa3Q9CQ71 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rpa3Q9CQ71 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rpa3Q9CQ71 Gm13809-201ENSMUST00000117921 597 ntBASIC12.22□□□□□ -0.45
Rpa3Q9CQ71 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC12.22□□□□□ -0.45
Rpa3Q9CQ71 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC12.22□□□□□ -0.45
Rpa3Q9CQ71 Gm45909-201ENSMUST00000212413 1031 ntBASIC12.22□□□□□ -0.45
Rpa3Q9CQ71 AC112945.1-201ENSMUST00000226413 514 ntBASIC12.22□□□□□ -0.45
Rpa3Q9CQ71 Gm1821-202ENSMUST00000227415 750 ntBASIC12.22□□□□□ -0.45
Rpa3Q9CQ71 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rpa3Q9CQ71 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rpa3Q9CQ71 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rpa3Q9CQ71 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rpa3Q9CQ71 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rpa3Q9CQ71 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC12.22□□□□□ -0.45
Rpa3Q9CQ71 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC12.22□□□□□ -0.45
Rpa3Q9CQ71 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Rpa3Q9CQ71 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rpa3Q9CQ71 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rpa3Q9CQ71 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Rpa3Q9CQ71 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rpa3Q9CQ71 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Rpa3Q9CQ71 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rpa3Q9CQ71 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rpa3Q9CQ71 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rpa3Q9CQ71 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rpa3Q9CQ71 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Rpa3Q9CQ71 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rpa3Q9CQ71 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rpa3Q9CQ71 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Rpa3Q9CQ71 Gm5859-201ENSMUST00000165401 2324 ntBASIC12.21□□□□□ -0.45
Rpa3Q9CQ71 Gm42498-201ENSMUST00000199981 1372 ntBASIC12.21□□□□□ -0.45
Rpa3Q9CQ71 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rpa3Q9CQ71 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rpa3Q9CQ71 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Rpa3Q9CQ71 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rpa3Q9CQ71 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rpa3Q9CQ71 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC12.21□□□□□ -0.45
Rpa3Q9CQ71 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rpa3Q9CQ71 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rpa3Q9CQ71 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rpa3Q9CQ71 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rpa3Q9CQ71 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rpa3Q9CQ71 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC12.21□□□□□ -0.45
Rpa3Q9CQ71 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Rpa3Q9CQ71 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rpa3Q9CQ71 Gm12579-201ENSMUST00000118040 783 ntBASIC12.21□□□□□ -0.45
Rpa3Q9CQ71 Gm15566-201ENSMUST00000121130 590 ntBASIC12.21□□□□□ -0.45
Rpa3Q9CQ71 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC12.21□□□□□ -0.45
Rpa3Q9CQ71 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC12.21□□□□□ -0.45
Rpa3Q9CQ71 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC12.21□□□□□ -0.45
Rpa3Q9CQ71 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rpa3Q9CQ71 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rpa3Q9CQ71 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC12.21□□□□□ -0.45
Rpa3Q9CQ71 CT009713.8-201ENSMUST00000225448 560 ntBASIC12.21□□□□□ -0.45
Rpa3Q9CQ71 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms