Protein–RNA interactions for Protein: Q99PV0

Prpf8, Pre-mRNA-processing-splicing factor 8, mousemouse

Known RBP Predictions only

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf8Q99PV0 Gm44292-201ENSMUST00000205194 2364 ntBASIC9.51□□□□□ -0.89
Prpf8Q99PV0 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Prpf8Q99PV0 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Prpf8Q99PV0 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Prpf8Q99PV0 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Prpf8Q99PV0 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC9.51□□□□□ -0.89
Prpf8Q99PV0 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC9.51□□□□□ -0.89
Prpf8Q99PV0 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Prpf8Q99PV0 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Prpf8Q99PV0 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Prpf8Q99PV0 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Prpf8Q99PV0 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Prpf8Q99PV0 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC9.51□□□□□ -0.89
Prpf8Q99PV0 Gm22146-201ENSMUST00000157397 288 ntBASIC9.51□□□□□ -0.89
Prpf8Q99PV0 Gm37391-201ENSMUST00000194891 2318 ntBASIC9.51□□□□□ -0.89
Prpf8Q99PV0 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC9.51□□□□□ -0.89
Prpf8Q99PV0 Mical1-201ENSMUST00000019967 3563 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Prpf8Q99PV0 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC9.51□□□□□ -0.89
Prpf8Q99PV0 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Prpf8Q99PV0 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Prpf8Q99PV0 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Prpf8Q99PV0 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Prpf8Q99PV0 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC9.51□□□□□ -0.89
Prpf8Q99PV0 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC9.51□□□□□ -0.89
Prpf8Q99PV0 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC9.51□□□□□ -0.89
Prpf8Q99PV0 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Prpf8Q99PV0 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Prpf8Q99PV0 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Prpf8Q99PV0 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Prpf8Q99PV0 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Prpf8Q99PV0 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Prpf8Q99PV0 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Prpf8Q99PV0 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC9.51□□□□□ -0.89
Prpf8Q99PV0 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Prpf8Q99PV0 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC9.51□□□□□ -0.89
Prpf8Q99PV0 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Prpf8Q99PV0 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Prpf8Q99PV0 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC9.5□□□□□ -0.89
Prpf8Q99PV0 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Prpf8Q99PV0 Gm45199-201ENSMUST00000207640 1507 ntBASIC9.5□□□□□ -0.89
Prpf8Q99PV0 AC130823.1-201ENSMUST00000228929 1549 ntBASIC9.5□□□□□ -0.89
Prpf8Q99PV0 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Prpf8Q99PV0 Myo5a-201ENSMUST00000123128 11702 ntTSL 5 BASIC9.5□□□□□ -0.89
Prpf8Q99PV0 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC9.5□□□□□ -0.89
Prpf8Q99PV0 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Prpf8Q99PV0 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Prpf8Q99PV0 Gm11783-201ENSMUST00000119549 885 ntBASIC9.5□□□□□ -0.89
Prpf8Q99PV0 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC9.5□□□□□ -0.89
Prpf8Q99PV0 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC9.5□□□□□ -0.89
Prpf8Q99PV0 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Prpf8Q99PV0 Gm43610-201ENSMUST00000199117 365 ntBASIC9.5□□□□□ -0.89
Prpf8Q99PV0 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC9.5□□□□□ -0.89
Prpf8Q99PV0 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC9.5□□□□□ -0.89
Prpf8Q99PV0 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC9.5□□□□□ -0.89
Prpf8Q99PV0 AC129308.3-201ENSMUST00000225652 524 ntBASIC9.5□□□□□ -0.89
Prpf8Q99PV0 Gm4604-201ENSMUST00000025040 390 ntBASIC9.5□□□□□ -0.89
Prpf8Q99PV0 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Prpf8Q99PV0 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Prpf8Q99PV0 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Prpf8Q99PV0 Gm37600-201ENSMUST00000193764 3292 ntBASIC9.5□□□□□ -0.89
Prpf8Q99PV0 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Prpf8Q99PV0 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Prpf8Q99PV0 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC9.5□□□□□ -0.89
Prpf8Q99PV0 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Prpf8Q99PV0 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Prpf8Q99PV0 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Prpf8Q99PV0 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC9.5□□□□□ -0.89
Prpf8Q99PV0 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Prpf8Q99PV0 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC9.5□□□□□ -0.89
Prpf8Q99PV0 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC9.5□□□□□ -0.89
Prpf8Q99PV0 Gm25053-201ENSMUST00000103982 133 ntBASIC9.5□□□□□ -0.89
Prpf8Q99PV0 Gm25922-201ENSMUST00000104281 130 ntBASIC9.5□□□□□ -0.89
Prpf8Q99PV0 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC9.5□□□□□ -0.89
Prpf8Q99PV0 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC9.5□□□□□ -0.89
Prpf8Q99PV0 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC9.5□□□□□ -0.89
Prpf8Q99PV0 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC9.5□□□□□ -0.89
Prpf8Q99PV0 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC9.5□□□□□ -0.89
Prpf8Q99PV0 Gm24679-201ENSMUST00000158762 111 ntBASIC9.5□□□□□ -0.89
Prpf8Q99PV0 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Prpf8Q99PV0 Gm26134-201ENSMUST00000178484 110 ntBASIC9.5□□□□□ -0.89
Prpf8Q99PV0 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC9.5□□□□□ -0.89
Prpf8Q99PV0 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC9.5□□□□□ -0.89
Prpf8Q99PV0 Gm25053-202ENSMUST00000199731 132 ntBASIC9.5□□□□□ -0.89
Prpf8Q99PV0 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC9.5□□□□□ -0.89
Prpf8Q99PV0 Gm30671-201ENSMUST00000214898 318 ntBASIC9.5□□□□□ -0.89
Prpf8Q99PV0 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Prpf8Q99PV0 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Prpf8Q99PV0 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Prpf8Q99PV0 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Prpf8Q99PV0 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Prpf8Q99PV0 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Prpf8Q99PV0 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Prpf8Q99PV0 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Prpf8Q99PV0 Gm44152-201ENSMUST00000205007 1691 ntBASIC9.5□□□□□ -0.89
Prpf8Q99PV0 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC9.5□□□□□ -0.89
Prpf8Q99PV0 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Prpf8Q99PV0 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
Prpf8Q99PV0 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Prpf8Q99PV0 Erich3-203ENSMUST00000189969 3460 ntBASIC9.49□□□□□ -0.89
Prpf8Q99PV0 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms