Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smarcd2Q99JR8 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Smarcd2Q99JR8 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smarcd2Q99JR8 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Smarcd2Q99JR8 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smarcd2Q99JR8 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Smarcd2Q99JR8 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smarcd2Q99JR8 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
Smarcd2Q99JR8 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.67□□□□□ -0.54
Smarcd2Q99JR8 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smarcd2Q99JR8 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
Smarcd2Q99JR8 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smarcd2Q99JR8 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smarcd2Q99JR8 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smarcd2Q99JR8 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smarcd2Q99JR8 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC11.67□□□□□ -0.54
Smarcd2Q99JR8 Gm17435-202ENSMUST00000212699 1998 ntBASIC11.67□□□□□ -0.54
Smarcd2Q99JR8 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Smarcd2Q99JR8 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Smarcd2Q99JR8 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.67□□□□□ -0.54
Smarcd2Q99JR8 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.67□□□□□ -0.54
Smarcd2Q99JR8 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.67□□□□□ -0.54
Smarcd2Q99JR8 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC11.67□□□□□ -0.54
Smarcd2Q99JR8 Gm12179-201ENSMUST00000118344 1272 ntBASIC11.67□□□□□ -0.54
Smarcd2Q99JR8 Mir1905-201ENSMUST00000122779 82 ntBASIC11.67□□□□□ -0.54
Smarcd2Q99JR8 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Smarcd2Q99JR8 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Smarcd2Q99JR8 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC11.67□□□□□ -0.54
Smarcd2Q99JR8 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC11.67□□□□□ -0.54
Smarcd2Q99JR8 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC11.67□□□□□ -0.54
Smarcd2Q99JR8 Gm43778-201ENSMUST00000199438 199 ntBASIC11.67□□□□□ -0.54
Smarcd2Q99JR8 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smarcd2Q99JR8 Gm45500-201ENSMUST00000211676 803 ntBASIC11.67□□□□□ -0.54
Smarcd2Q99JR8 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Smarcd2Q99JR8 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Smarcd2Q99JR8 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC11.67□□□□□ -0.54
Smarcd2Q99JR8 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smarcd2Q99JR8 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smarcd2Q99JR8 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smarcd2Q99JR8 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smarcd2Q99JR8 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Smarcd2Q99JR8 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Smarcd2Q99JR8 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smarcd2Q99JR8 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.67□□□□□ -0.54
Smarcd2Q99JR8 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smarcd2Q99JR8 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smarcd2Q99JR8 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smarcd2Q99JR8 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smarcd2Q99JR8 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smarcd2Q99JR8 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Smarcd2Q99JR8 AC165351.1-201ENSMUST00000219078 2020 ntBASIC11.67□□□□□ -0.54
Smarcd2Q99JR8 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smarcd2Q99JR8 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
Smarcd2Q99JR8 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Smarcd2Q99JR8 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smarcd2Q99JR8 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smarcd2Q99JR8 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Smarcd2Q99JR8 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smarcd2Q99JR8 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Smarcd2Q99JR8 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC11.66□□□□□ -0.54
Smarcd2Q99JR8 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Smarcd2Q99JR8 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Smarcd2Q99JR8 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Smarcd2Q99JR8 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Smarcd2Q99JR8 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smarcd2Q99JR8 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Smarcd2Q99JR8 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smarcd2Q99JR8 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Smarcd2Q99JR8 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smarcd2Q99JR8 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smarcd2Q99JR8 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smarcd2Q99JR8 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Smarcd2Q99JR8 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Smarcd2Q99JR8 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smarcd2Q99JR8 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Smarcd2Q99JR8 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smarcd2Q99JR8 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC11.66□□□□□ -0.54
Smarcd2Q99JR8 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Smarcd2Q99JR8 Gm14993-201ENSMUST00000121180 164 ntBASIC11.66□□□□□ -0.54
Smarcd2Q99JR8 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC11.66□□□□□ -0.54
Smarcd2Q99JR8 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC11.66□□□□□ -0.54
Smarcd2Q99JR8 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Smarcd2Q99JR8 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC11.66□□□□□ -0.54
Smarcd2Q99JR8 Gm24992-201ENSMUST00000157412 130 ntBASIC11.66□□□□□ -0.54
Smarcd2Q99JR8 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC11.66□□□□□ -0.54
Smarcd2Q99JR8 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC11.66□□□□□ -0.54
Smarcd2Q99JR8 Gm29067-201ENSMUST00000190821 470 ntBASIC11.66□□□□□ -0.54
Smarcd2Q99JR8 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
Smarcd2Q99JR8 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC11.66□□□□□ -0.54
Smarcd2Q99JR8 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Smarcd2Q99JR8 Gm18204-201ENSMUST00000209835 793 ntBASIC11.66□□□□□ -0.54
Smarcd2Q99JR8 Gm45856-201ENSMUST00000212752 416 ntBASIC11.66□□□□□ -0.54
Smarcd2Q99JR8 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC11.66□□□□□ -0.54
Smarcd2Q99JR8 CT025602.2-201ENSMUST00000226553 772 ntBASIC11.66□□□□□ -0.54
Smarcd2Q99JR8 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smarcd2Q99JR8 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smarcd2Q99JR8 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Smarcd2Q99JR8 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Smarcd2Q99JR8 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Smarcd2Q99JR8 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms